RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 HLA-DOBP13765 273 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 MTCP1P56278 107 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 RAB38P57729 211 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 GLYR1Q49A26 553 aaPredicted RBP12.09□□□□□ -0.47
RNF43-208ENST00000584437 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
RNF43-208ENST00000584437 OPN5Q6U736 354 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 GDF7Q7Z4P5 450 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 BPHLQ86WA6 291 aaPredicted RBP12.09□□□□□ -0.47
RNF43-208ENST00000584437 BAGE3Q86Y29 109 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 BAGE2Q86Y30 109 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 IL22RA1Q8N6P7 574 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 PIGCQ92535 297 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 MYOTQ9UBF9 498 aa12.09□□□□□ -0.47
RNF43-208ENST00000584437 TCRBV5S1A1TA0A578 114 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 PRAMEF26H0Y7S4 382 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 CLN5O75503 358 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 OR7C1O76099 320 aaPredicted RBP12.08□□□□□ -0.47
RNF43-208ENST00000584437 CHRM2P08172 466 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 S100A7P31151 101 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 TGFBR3Q03167 851 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 SRYQ05066 204 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 HNF4GQ14541 408 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 ABHD17BQ5VST6 288 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 FAM26EQ8N5C1 309 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 MS4A8Q9BY19 250 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 GABARAPL3Q9BY60 117 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 UBQLN3Q9H347 655 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 PCDHGA1Q9Y5H4 931 aa12.08□□□□□ -0.47
RNF43-208ENST00000584437 SERINC4A6NH21 518 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 CYB5BO43169 146 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 TGOLN2O43493 480 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 PSMB5P28074 263 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 ZNF684Q5T5D7 378 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 ZNF761Q86XN6 746 aaPredicted RBP12.08□□□□□ -0.48
RNF43-208ENST00000584437 MISPQ8IVT2 679 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 LGI3Q8N145 548 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
RNF43-208ENST00000584437 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SLC6A18Q96N87 628 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SLAMF7Q9NQ25 335 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 M0QYG6 137 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SLC10A3P09131 477 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 CPEP16870 476 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 CD53P19397 219 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 RACK1P63244 317 aaKnown RBP12.08□□□□□ -0.48
RNF43-208ENST00000584437 COX20Q5RI15 118 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 NMNAT3Q96T66 252 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 C1QTNF3Q9BXJ4 246 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 GHRLQ9UBU3 117 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 POU3F3P20264 500 aaPredicted RBP12.08□□□□□ -0.48
RNF43-208ENST00000584437 OR1D4P47884 311 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SLC7A9P82251 487 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 REEP5Q00765 189 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 OR52W1Q6IF63 320 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SLC35D2Q76EJ3 337 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 MMP21Q8N119 569 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 ZNF75AQ96N20 296 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 FOXN4Q96NZ1 517 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SGPP1Q9BX95 441 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 TGIF2Q9GZN2 237 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 LINC00597Q9H2U6 94 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 OR52A1Q9UKL2 312 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 TRAV36DV7A0A075B6V5 113 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 A6NL46 340 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 EDN1P05305 212 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 PSMB3P49720 205 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 SYT14P1Q58G82 188 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 FOXB2Q5VYV0 432 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 ADAM5Q6NVV9 412 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 LANCL3Q6ZV70 420 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 NAA40Q86UY6 237 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 PRSS35Q8N3Z0 413 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 HSFX1Q9UBD0 423 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 FTSJ1Q9UET6 329 aa12.08□□□□□ -0.48
RNF43-208ENST00000584437 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 GLCEO94923 617 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 CD14P08571 375 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 EEF1A1P68104 462 aaKnown RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 RNLSQ5VYX0 342 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 NPSR1Q6W5P4 371 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 HSD17B11Q8NBQ5 300 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 DCLRE1CQ96SD1 692 aaKnown RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 POFUT1Q9H488 388 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 MMP11P24347 488 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 HOXD9P28356 352 aaPredicted RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 TRHRP34981 398 aaPredicted RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 CTU2Q2VPK5 515 aaKnown RBP12.07□□□□□ -0.48
RNF43-208ENST00000584437 ESPNLQ6ZVH7 1005 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 SLC46A1Q96NT5 459 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 AMDHD1Q96NU7 426 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 TUBB1Q9H4B7 451 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 GABRQQ9UN88 632 aa12.07□□□□□ -0.48
RNF43-208ENST00000584437 LRP5LA4QPB2 252 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms