RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HOPXQ9BPY8 73 aaPredicted RBP17.86■□□□□ 0.45
SS18-224ENST00000584083 SLC19A3Q9BZV2 496 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 FKRPQ9H9S5 495 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 CRLF2Q9HC73 371 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 NANSQ9NR45 359 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 MED29Q9NX70 200 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 ATP23Q9Y6H3 246 aa17.86■□□□□ 0.45
SS18-224ENST00000584083 SLC35F4A4IF30 521 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 E7EQL1 145 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 RPL36A-HNRNPH2H7BZ11 118 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 M0R3G1 203 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 OVOL3O00110 214 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 UMPSP11172 480 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 CDKN1AP38936 164 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 NUDT2P50583 147 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 CEACAM16Q2WEN9 425 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 AGAP6Q5VW22 663 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 ANKK1Q8NFD2 765 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 LZICQ8WZA0 190 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 PRSS27Q9BQR3 290 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 BDH2Q9BUT1 245 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 GMPR2Q9P2T1 348 aaKnown RBP17.85■□□□□ 0.45
SS18-224ENST00000584083 RIMS3Q9UJD0 308 aa17.85■□□□□ 0.45
SS18-224ENST00000584083 GSTA4O15217 222 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 OR5F1O95221 314 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 LSP1P33241 339 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 SLC7A2P52569 658 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 RIPPLY3P57055 190 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 SELENOWP63302 87 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 TUBA1BP68363 451 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 TUBA4AP68366 448 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 PIN1Q13526 163 aaPredicted RBP17.84■□□□□ 0.45
SS18-224ENST00000584083 CAMK2DQ13557 499 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 TUBA1AQ71U36 451 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 C20orf196Q8IYI0 205 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 LRRC17Q8N6Y2 441 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 OR6N1Q8NGY5 312 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 MAGEE2Q8TD90 523 aaPredicted RBP17.84■□□□□ 0.45
SS18-224ENST00000584083 CMTM5Q96DZ9 223 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 DHRS9Q9BPW9 319 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 KCNS3Q9BQ31 491 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 ZNF426Q9BUY5 554 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 TRAF4Q9BUZ4 470 aaPredicted RBP17.84■□□□□ 0.45
SS18-224ENST00000584083 POLR2J2Q9GZM3 115 aaKnown RBP17.84■□□□□ 0.45
SS18-224ENST00000584083 POLR2J3Q9H1A7 115 aaKnown RBP17.84■□□□□ 0.45
SS18-224ENST00000584083 GSX1Q9H4S2 264 aaPredicted RBP17.84■□□□□ 0.45
SS18-224ENST00000584083 B3GAT2Q9NPZ5 323 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 ZNF229Q9UJW7 825 aa17.84■□□□□ 0.45
SS18-224ENST00000584083 GMNCA6NCL1 334 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 H7C1Q1 480 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 NME4O00746 187 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 CD8AP01732 235 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 INHBBP09529 407 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 HOXB1P14653 301 aaPredicted RBP17.83■□□□□ 0.44
SS18-224ENST00000584083 DRD4P21917 467 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 PAX7P23759 505 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 FABP6P51161 128 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 PHYHD1Q5SRE7 291 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 NHLRC1Q6VVB1 395 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 HACD2Q6Y1H2 254 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 B3GLCTQ6Y288 498 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 NKAIN4Q8IVV8 208 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 FBXL14Q8N1E6 418 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 ZNF837Q96EG3 531 aaPredicted RBP17.83■□□□□ 0.44
SS18-224ENST00000584083 LRR1Q96L50 414 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 MOKQ9UQ07 419 aa17.83■□□□□ 0.44
SS18-224ENST00000584083 ARPC4-TTLL3A0A0A6YYG9 625 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 IGHV1-18A0A0C4DH31 117 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 TRIM64A6NGJ6 449 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 TRIM64BA6NI03 449 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 CXCR6O00574 342 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 NDUFAB1O14561 156 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 RNF13O43567 381 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 SNX3O60493 162 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 ZNF682O95780 498 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 IFNGR1P15260 489 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 TTKP33981 857 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 RBM34P42696 430 aaKnown RBP17.82■□□□□ 0.44
SS18-224ENST00000584083 GYS2P54840 703 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 BIDP55957 195 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 ZP4Q12836 540 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 NANOGNBQ7Z5D8 188 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 BIVMQ86UB2 503 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 DTX2Q86UW9 622 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 TMEM255BQ8WV15 326 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 SLC38A2Q96QD8 506 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 MYLK2Q9H1R3 596 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 NELFAQ9H3P2 528 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 MEPEQ9NQ76 525 aaPredicted RBP17.82■□□□□ 0.44
SS18-224ENST00000584083 TAS2R5Q9NYW4 299 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 POFUT2Q9Y2G5 429 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 C2CD3Q4AC94 2353 aa17.82■□□□□ 0.44
SS18-224ENST00000584083 SETD2Q9BYW2 2564 aaPredicted RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 ZNF99A8MXY4 864 aaPredicted RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 ATP6V1G2-DDX39BF2Z307 99 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 BLOC1S5-TXNDC5H3BN57 136 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 SMAD7O15105 426 aaKnown RBP17.81■□□□□ 0.44
SS18-224ENST00000584083 SEC14L2O76054 403 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 MT-ND1P03886 318 aa17.81■□□□□ 0.44
SS18-224ENST00000584083 THRBP10828 461 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms