RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 MYDGFQ969H8 173 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 ZNF566Q969W8 418 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 SCMH1Q96GD3 660 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 PLEKHA8Q96JA3 519 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 NODALQ96S42 347 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 DMRTA2Q96SC8 542 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 CCDC90BQ9GZT6 254 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 ASH2LQ9UBL3 628 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 RNF6Q9Y252 685 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 DCHS2Q6V1P9 2916 aa9.22□□□□□ -0.93
SS18-221ENST00000582448 NCOA6Q14686 2063 aaPredicted RBP9.21□□□□□ -0.93
SS18-221ENST00000582448 A0A0B4J2E0 115 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 A0A1B0GWA3 101 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 A0A1B0GX12 115 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 CCDC160A6NGH7 325 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 UNC119BA6NIH7 251 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 OR6C70A6NIJ9 312 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 PTGES3LE9PB15 166 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 M0R3G1 203 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 NOL3O60936 208 aaKnown RBP9.21□□□□□ -0.94
SS18-221ENST00000582448 OR6B1O95007 311 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 RCBTB2O95199 551 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 SOX14O95416 240 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 IFI30P13284 250 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 ZNF24P17028 368 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 HTR2AP28223 471 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 ABCD3P28288 659 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 PTGS2P35354 604 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 CDH15P55291 814 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 SLC26A5P58743 744 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 GPR85P60893 370 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 MYBPHQ13203 477 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 GINS1Q14691 196 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 CTU2Q2VPK5 515 aaKnown RBP9.21□□□□□ -0.94
SS18-221ENST00000582448 SLX4IPQ5VYV7 408 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 H3F3CQ6NXT2 135 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 SLC27A4Q6P1M0 643 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 GPR141Q7Z602 305 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 FGD2Q7Z6J4 655 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 SIAH3Q8IW03 269 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 SLC15A4Q8N697 577 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 ZNF441Q8N8Z8 693 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 NFAM1Q8NET5 270 aaPredicted RBP9.21□□□□□ -0.94
SS18-221ENST00000582448 OR8J1Q8NGP2 316 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 RHOXF1Q8NHV9 184 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 M1APQ8TC57 530 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 NDEL1Q9GZM8 345 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 LAT2Q9GZY6 243 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 KCNJ16Q9NPI9 418 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 SDHAF3Q9NRP4 125 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 TBC1D23Q9NUY8 699 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 CNIH4Q9P003 139 aa9.21□□□□□ -0.94
SS18-221ENST00000582448 ITPR3Q14573 2671 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TRIM64A6NGJ6 449 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 EFCAB9A8MZ26 197 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 ALG1L2C9J202 215 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TP53I11O14683 189 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TFECO14948 347 aaPredicted RBP9.2□□□□□ -0.94
SS18-221ENST00000582448 HCRTR2O43614 444 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 RGS10O43665 173 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TSPAN2O60636 221 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 HCN1O60741 890 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 ICOSLGO75144 302 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 SLC25A12O75746 678 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 NEURL1O76050 574 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 NUDT14O95848 222 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 HMGN1P05114 100 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 SAGP10523 405 aaPredicted RBP9.2□□□□□ -0.94
SS18-221ENST00000582448 PGCP20142 388 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 EPHA2P29317 976 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 FMO3P31513 532 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 ACAA2P42765 397 aaKnown RBP9.2□□□□□ -0.94
SS18-221ENST00000582448 OMPP47874 163 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 SNRPGP62308 76 aaKnown RBP9.2□□□□□ -0.94
SS18-221ENST00000582448 PRKCDQ05655 676 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 SKP2Q13309 424 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TMEM44Q2T9K0 475 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 FAM209AQ5JX71 171 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 MEDAGQ5VYS4 303 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TMEM211Q6ICI0 200 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 NUP54Q7Z3B4 507 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 RPS19BP1Q86WX3 136 aaKnown RBP9.2□□□□□ -0.94
SS18-221ENST00000582448 CCDC71Q8IV32 467 aaPredicted RBP9.2□□□□□ -0.94
SS18-221ENST00000582448 SLC43A2Q8N370 569 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 CLDN22Q8N7P3 220 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 GATSQ8NAP1 163 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 APCDD1LQ8NCL9 501 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 ASB5Q8WWX0 329 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 RND1Q92730 232 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 BPIFA2Q96DR5 249 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 KCNJ15Q99712 375 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 TUBA1CQ9BQE3 449 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 SLC19A3Q9BZV2 496 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 SLC25A19Q9HC21 320 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 MMP25Q9NPA2 562 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 PLCXD1Q9NUJ7 323 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 CARD8Q9Y2G2 431 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 CDH10Q9Y6N8 788 aa9.2□□□□□ -0.94
SS18-221ENST00000582448 CACNA1CQ13936 2221 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms