RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PRR23D1E9PI22 279 aaPredicted RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 H3BSA7 217 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 IDH3BO43837 385 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 OR2T1O43869 369 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 PTP4A3O75365 173 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 CTAG2O75638 210 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 AHSA1O95433 338 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 MT-ATP6P00846 226 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 PEPDP12955 493 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 CCNA2P20248 432 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 PSMB9P28065 219 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 GTF2E2P29084 291 aaKnown RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 SOX3P41225 446 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 APOBEC1P41238 236 aaKnown RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 CDH11P55287 796 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 DLX5P56178 289 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 LTBQ06643 244 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 RAB40BQ12829 278 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 TBCEQ15813 527 aaPredicted RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 SYT14P1Q58G82 188 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 EMC4Q5J8M3 183 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 DESI1Q6ICB0 168 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 POMZP3Q6PJE2 187 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 ARSKQ6UWY0 536 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 B3GNT6Q6ZMB0 384 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 DPY19L2P2Q6ZN68 376 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 GPALPP1Q8IXQ4 340 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 LNX2Q8N448 690 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 OR4K17Q8NGC6 315 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 OR13F1Q8NGS4 319 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 ZNF582Q96NG8 517 aaPredicted RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 TNFRSF13CQ96RJ3 184 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 SMR3AQ99954 134 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 CDCA4Q9BXL8 241 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 FKBP14Q9NWM8 211 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 PAK1IP1Q9NWT1 392 aaPredicted RBP9.13□□□□□ -0.95
SS18-207ENST00000577636 HPF1Q9NWY4 346 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 IL20RAQ9UHF4 553 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 KLHL21Q9UJP4 597 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 ZNF229Q9UJW7 825 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 OSGIN1Q9UJX0 560 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 TMED7Q9Y3B3 224 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 WIF1Q9Y5W5 379 aa9.13□□□□□ -0.95
SS18-207ENST00000577636 PINLYPA6NC86 204 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 KDM4EB2RXH2 506 aaPredicted RBP9.12□□□□□ -0.95
SS18-207ENST00000577636 G3V3Y1 287 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 BHLHE40O14503 412 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 MYL12BO14950 172 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 SUSD5O60279 629 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 SEC14L2O76054 403 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 OR6A2O95222 327 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 RAB36O95755 333 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 HTR1AP08908 422 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 DBTP11182 482 aaKnown RBP9.12□□□□□ -0.95
SS18-207ENST00000577636 FKBP2P26885 142 aaKnown RBP9.12□□□□□ -0.95
SS18-207ENST00000577636 ACVR2AP27037 513 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 CASP3P42574 277 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 KIR2DL3P43628 341 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 MTNR1AP48039 350 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 MASP1P48740 699 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 TMBIM6P55061 237 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ADAM8P78325 824 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 LGALS3BPQ08380 585 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 TMED1Q13445 227 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 MFSD13AQ14CX5 517 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ZNF74Q16587 644 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 CNPY1Q3B7I2 92 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ZNF791Q3KP31 576 aaPredicted RBP9.12□□□□□ -0.95
SS18-207ENST00000577636 GPR107Q5VW38 600 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 NXNL2Q5VZ03 156 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 XAF1Q6GPH4 301 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 IL20RBQ6UXL0 311 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 LIX1LQ8IVB5 337 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 OR10G3Q8NGC4 313 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 OR9Q1Q8NGQ5 310 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 RAB2BQ8WUD1 216 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 LIPHQ8WWY8 451 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 TMIGD2Q96BF3 282 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 DDIT4LQ96D03 193 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 RNFT2Q96EX2 444 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ERMAPQ96PL5 475 aaPredicted RBP9.12□□□□□ -0.95
SS18-207ENST00000577636 TSC22D3Q99576 134 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 TTYH2Q9BSA4 534 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 MND1Q9BWT6 205 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ASPNQ9BXN1 380 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 YIPF3Q9GZM5 350 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 RACGAP1Q9H0H5 632 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 EXO5Q9H790 373 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 FKRPQ9H9S5 495 aa9.12□□□□□ -0.95
SS18-207ENST00000577636 ACOT13Q9NPJ3 140 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms