RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SPACA5Q96QH8 159 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TMEM231Q9H6L2 316 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 KRBOX1C9JBD0 128 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 H7C417 338 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 PAPLNO95428 1278 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TSPAN15O95858 294 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 GNRHRP30968 328 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 CSRP3P50461 194 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 PER3P56645 1201 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TAS2R19P59542 299 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TAGLNQ01995 201 aaKnown RBP16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 NFATC4Q14934 902 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 EEF1A1P5Q5VTE0 462 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TMEM215Q68D42 235 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TMUB2Q71RG4 321 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 PM20D2Q8IYS1 436 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 TCTE3Q8IZS6 198 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 ESX1Q8N693 406 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 HHIPL1Q96JK4 782 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 ZNF285Q96NJ3 590 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 LRIT1Q9P2V4 623 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 EMC9Q9Y3B6 208 aa16.46■□□□□ 0.23
ATPAF1-214ENST00000576409 AGAP14A8MT82 685 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 CAMLGP49069 296 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 HMGA2P52926 109 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 EMP2P54851 167 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 POU3F1Q03052 451 aaPredicted RBP16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 NLRC3Q7RTR2 1065 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 FAM3DQ96BQ1 224 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 GPA33Q99795 319 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 FBXO34Q9NWN3 711 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 TEX51A0A1B0GUA7 166 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 CDC42EP2O14613 210 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 HSPA12AO43301 675 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 CHP2O43745 196 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 UBBP0CG47 229 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 UBCP0CG48 685 aaKnown RBP16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 PPT1P50897 306 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 SEC61A1P61619 476 aaKnown RBP16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 DUSP6Q16828 381 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 PHF19Q5T6S3 580 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC6A19Q695T7 634 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 SDK2Q58EX2 2172 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 MEGF11A6BM72 1044 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 WNT1P04628 370 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 TPMTP51580 245 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 CAV2P51636 162 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 ZP2Q05996 745 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 MPEG1Q2M385 716 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 PXKQ7Z7A4 578 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 C2CD4CQ8TF44 421 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 DHRS9Q9BPW9 319 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 AIFM2Q9BRQ8 373 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC5A7Q9GZV3 580 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 CYSLTR2Q9NS75 346 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 DAPP1Q9UN19 280 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 IGLV3-16A0A075B6K0 115 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 SEMA4FO95754 770 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 EPXP11678 715 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 ALKBH1Q13686 389 aaKnown RBP16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 IRF3Q14653 427 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 ST3GAL2Q16842 350 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 LRRC69Q6ZNQ3 347 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 OR5M1Q8NGP8 315 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 CHAC2Q8WUX2 184 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 TIMM29Q9BSF4 260 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF416Q9BWM5 594 aa16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 PITHD1Q9GZP4 211 aaPredicted RBP16.45■□□□□ 0.22
ATPAF1-214ENST00000576409 TSPAN11A1L157 253 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 C1orf196B1AJZ1 125 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 CTNSO60931 367 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 PNMTP11086 282 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 MYOGP15173 224 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC26A5P58743 744 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 HACD4Q5VWC8 232 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 C3orf33Q6P1S2 294 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF704Q6ZNC4 412 aaPredicted RBP16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 MED25Q71SY5 747 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF565Q8N9K5 539 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 OR4D9Q8NGE8 314 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 OR51T1Q8NGJ9 327 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 OR1E3Q8WZA6 343 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 MEPEQ9NQ76 525 aaPredicted RBP16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 DHCR7Q9UBM7 475 aaKnown RBP16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 PIAS3Q9Y6X2 628 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 MTRF1O75570 445 aaKnown RBP16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 PI3P19957 117 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 NME2P22392 152 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 TAS2R20P59543 309 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 GUCA2AQ02747 115 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 LINC00303Q3SY05 128 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF529Q6P280 563 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 MARCH3Q86UD3 253 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 FAM174AQ8TBP5 190 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 LRRC46Q96FV0 321 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 CDC6Q99741 560 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 ATAD5Q96QE3 1844 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 UBR3Q6ZT12 1888 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms