RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 C9orf135Q5VTT2 229 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 ALKBH2Q6NS38 261 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 HMBOX1Q6NT76 420 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 SLC35D2Q76EJ3 337 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 PIWIL3Q7Z3Z3 882 aaKnown RBP13.41□□□□□ -0.26
LITAF-217ENST00000575426 OAFQ86UD1 273 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 P2RY8Q86VZ1 359 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 AQP12AQ8IXF9 295 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 SLC7A13Q8TCU3 470 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 MUCL1Q96DR8 90 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
LITAF-217ENST00000575426 EMC6Q9BV81 110 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
LITAF-217ENST00000575426 HEATR1Q9H583 2144 aaKnown RBP13.41□□□□□ -0.26
LITAF-217ENST00000575426 NGBQ9NPG2 151 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 B3GAT2Q9NPZ5 323 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 MED29Q9NX70 200 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 ALPK2Q86TB3 2170 aa13.41□□□□□ -0.26
LITAF-217ENST00000575426 EBAG9O00559 213 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 ACOT8O14734 319 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 RAD51DO75771 328 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 KRT36O76013 467 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 ZNF432O94892 652 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 IFNGR1P15260 489 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
LITAF-217ENST00000575426 CDH2P19022 906 aaPredicted RBP13.4□□□□□ -0.26
LITAF-217ENST00000575426 MAKP20794 623 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 FUT4P22083 530 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 CRYGSP22914 178 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 HOXC12P31275 282 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 RRM2P31350 389 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 AQP2P41181 271 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 SLC9A3P48764 834 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 BIDP55957 195 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 RPL18Q07020 188 aaKnown RBP13.4□□□□□ -0.26
LITAF-217ENST00000575426 IQCCQ4KMZ1 466 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 CARD17Q5XLA6 110 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 SSX8Q7RTT4 187 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 HDDC2Q7Z4H3 204 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 SPATA24Q86W54 205 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 WFDC8Q8IUA0 241 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 OR6N1Q8NGY5 312 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 TXNDC15Q96J42 360 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 DHRS1Q96LJ7 313 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 OR2M2Q96R28 347 aa13.4□□□□□ -0.26
LITAF-217ENST00000575426 CADM1Q9BY67 442 aaKnown RBP13.4□□□□□ -0.26
LITAF-217ENST00000575426 POLDIP3Q9BY77 421 aaKnown RBP13.4□□□□□ -0.26
LITAF-217ENST00000575426 UNC79Q9P2D8 2635 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 MCIDASD6RGH6 385 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 UPK3AO75631 287 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 CTAG2O75638 210 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 F13BP05160 661 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 RAP2AP10114 183 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 IFNGR2P38484 337 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 GPR4P46093 362 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 ROR2Q01974 943 aaKnown RBP13.39□□□□□ -0.27
LITAF-217ENST00000575426 CAMK2DQ13557 499 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 LAPTM4AQ15012 233 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 TIMM23BQ5SRD1 257 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 TMPRSS11FQ6ZWK6 438 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 C1orf162Q8NEQ5 155 aaPredicted RBP13.39□□□□□ -0.27
LITAF-217ENST00000575426 OR4K5Q8NGD3 323 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 OR51A7Q8NH64 312 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 OR6X1Q8NH79 312 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 FAM46AQ96IP4 442 aaKnown RBP13.39□□□□□ -0.27
LITAF-217ENST00000575426 LRR1Q96L50 414 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 ALKBH3Q96Q83 286 aaPredicted RBP13.39□□□□□ -0.27
LITAF-217ENST00000575426 ALPK1Q96QP1 1244 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 RASSF1Q9NS23 344 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 STX18Q9P2W9 335 aaKnown RBP13.39□□□□□ -0.27
LITAF-217ENST00000575426 POMPQ9Y244 141 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 DCHS2Q6V1P9 2916 aa13.39□□□□□ -0.27
LITAF-217ENST00000575426 TRBV4-1A0A0J9YWV2 114 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 DHRS12A0PJE2 317 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 OR5H1A6NKK0 313 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 M0R3G1 203 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 PDLIM1O00151 329 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 CLOCKO15516 846 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 OR10H3O60404 316 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 THBDP07204 575 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 ITGA5P08648 1049 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 CSNK1A1P48729 337 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 DAP3P51398 398 aaKnown RBP13.38□□□□□ -0.27
LITAF-217ENST00000575426 FOXG1P55316 489 aaPredicted RBP13.38□□□□□ -0.27
LITAF-217ENST00000575426 PRPS1P60891 318 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
LITAF-217ENST00000575426 LGALS3BPQ08380 585 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 PPA1Q15181 289 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 TAB1Q15750 504 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 GABRA6Q16445 453 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 ZBED5Q49AG3 693 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 ALG10Q5BKT4 473 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 BEX5Q5H9J7 111 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 KLHL24Q6TFL4 600 aa13.38□□□□□ -0.27
LITAF-217ENST00000575426 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms