RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 DEFB113Q30KQ7 82 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 TBRG1Q3YBR2 411 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 C11orf71Q6IPW1 123 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 NIPAL3Q6P499 406 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 AAED1Q7RTV5 226 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 PXKQ7Z7A4 578 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 CPLX4Q7Z7G2 160 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 P2RY8Q86VZ1 359 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 C20orf196Q8IYI0 205 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 POMGNT2Q8NAT1 580 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 PIK3C3Q8NEB9 887 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 ANKK1Q8NFD2 765 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 OR52N5Q8NH56 324 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 MAGEE2Q8TD90 523 aaPredicted RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 TMEM239Q8WW34 195 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 GEMIN6Q8WXD5 167 aaKnown RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 PROX1Q92786 737 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 EPYCQ99645 322 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 EMC6Q9BV81 110 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 MRPL13Q9BYD1 178 aaKnown RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 GORASP2Q9H8Y8 452 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 GPR35Q9HC97 309 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 DCAF13Q9NV06 445 aaKnown RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 TAGLN3Q9UI15 199 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 A0A087WUU8 490 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 IGKV1D-43A0A0B4J1Z2 117 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 IGHV1-18A0A0C4DH31 117 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 TCRBV5S2A0A599 114 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 SLC35F4A4IF30 521 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 NPIPB13A6NJU9 1138 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 NPIPB4C9JG80 1138 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ARPC2O15144 300 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 DCTN3O75935 186 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 OR7A10O76100 309 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ZNF682O95780 498 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 CH25HO95992 272 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 IGKV3-15P01624 115 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 IGHMP01871 453 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 MSX2P35548 267 aaPredicted RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 NR1H2P55055 460 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ADAM8P78325 824 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ROR2Q01974 943 aaKnown RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 RPL18Q07020 188 aaKnown RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 MELKQ14680 651 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 MFSD13AQ14CX5 517 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 SEC23BQ15437 767 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 STK11Q15831 433 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ZNF672Q499Z4 452 aaPredicted RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 IFI44LQ53G44 452 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 TMEM225Q6GV28 225 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 C20orf204Q6ZNR8 217 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 DNM1P46Q6ZS02 220 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 DTX2Q86UW9 622 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 MEX3DQ86XN8 651 aaKnown RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 ZNF611Q8N823 705 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 WFDC11Q8NEX6 87 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 MOSPD2Q8NHP6 518 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 SLC7A13Q8TCU3 470 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ASB10Q8WXI3 467 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 TMEM54Q969K7 222 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 TPD52L3Q96J77 140 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 LRRC37BQ96QE4 947 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 PIP5K1AQ99755 562 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 GPA33Q99795 319 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 KCTD14Q9BQ13 255 aaPredicted RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 UBTD1Q9HAC8 227 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ZNF701Q9NV72 531 aaPredicted RBP7.57□□□□□ -1.2
SMG6-216ENST00000575176 PARPBPQ9NWS1 579 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 RHCGQ9UBD6 479 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 SLC13A4Q9UKG4 626 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ADAM21Q9UKJ8 722 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 RNF115Q9Y4L5 304 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 NOX1Q9Y5S8 564 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 ENPP4Q9Y6X5 453 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 RTTNQ86VV8 2226 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 TANC2Q9HCD6 1990 aa7.57□□□□□ -1.2
SMG6-216ENST00000575176 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 E7EQL1 145 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 ABCD4O14678 606 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 SEC14L2O76054 403 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 IFNW1P05000 195 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 IGFBP1P08833 259 aaPredicted RBP7.56□□□□□ -1.2
SMG6-216ENST00000575176 CELA3BP08861 270 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 IFNGR1P15260 489 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 ZNF43P17038 809 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 CD40P25942 277 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 CALCRP30988 508 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 MAGEA2P43356 314 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 YAP1P46937 504 aaKnown RBP7.56□□□□□ -1.2
SMG6-216ENST00000575176 TAS2R41P59536 307 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 TUBA1BP68363 451 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 TUBA4AP68366 448 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 MSMPQ1L6U9 139 aa7.56□□□□□ -1.2
SMG6-216ENST00000575176 CEACAM16Q2WEN9 425 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms