RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TMPRSS13Q9BYE2 586 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 SRA1Q9HD15 236 aaKnown RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 SDHAF2Q9NX18 166 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 OR10H1Q9Y4A9 318 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 C2orf16Q68DN1 1984 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 A0A0J9YY10 115 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 A0A1B0GTH9 108 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 ANXA2P2A6NMY6 339 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 A8MUA0 341 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 RBBP9O75884 186 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 SNAPC5O75971 98 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 GLSO94925 669 aaPredicted RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 ANXA2P07355 339 aaKnown RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 CTSBP07858 339 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 MNDAP41218 407 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 PPP1CAP62136 330 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 LTBQ06643 244 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 GPM6BQ13491 265 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 PCGF3Q3KNV8 242 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 SFRP5Q5T4F7 317 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 BPHLQ86WA6 291 aaPredicted RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 GLB1L2Q8IW92 636 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 GPX7Q96SL4 187 aaPredicted RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 REV3LO60673 3130 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 KIAA0100Q14667 2235 aaKnown RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 POU3F2P20265 443 aaPredicted RBP14.25□□□□□ -0.13
NUP88-207ENST00000573584 COL9A1P20849 921 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 PTGS2P35354 604 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 TNFRSF4P43489 277 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 PLA2G7Q13093 441 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 DEFB110Q30KQ9 67 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 LRRN1Q6UXK5 716 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 LRRTM1Q86UE6 522 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 SFTPA2Q8IWL1 248 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 OR1F2PQ96R84 312 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 C12orf10Q9HB07 376 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 CPNE7Q9UBL6 633 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 IKZF2Q9UKS7 526 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 SCML1Q9UN30 329 aa14.25□□□□□ -0.13
NUP88-207ENST00000573584 TRANK1O15050 2925 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 IGKV1D-42A0A075B6H8 117 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 UBE2QL1A1L167 161 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 ELOA3DA6NLF2 546 aaPredicted RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 H3BSH0 61 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CDK2AP1O14519 115 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 ARPC5O15511 151 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 VSIG10L2P0DP72 767 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 MAP2K6P52564 334 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 PSMD4P55036 377 aaKnown RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 SEC61A1P61619 476 aaKnown RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 OC90Q02509 493 aaPredicted RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 ELOA3BQ3SY89 546 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 ELOA3Q8NG57 546 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 ZDHHC1Q8WTX9 485 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CCDC74AQ96AQ1 378 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 RPP25Q9BUL9 199 aaKnown RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 REG4Q9BYZ8 158 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 SLC19A3Q9BZV2 496 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 PPA2Q9H2U2 334 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CD93Q9NPY3 652 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 KCNMB2Q9Y691 235 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 TRAV8-7A0A075B6U6 113 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 A0A1W2PQF6 199 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 TGFBR3LH3BV60 316 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 FOXS1O43638 330 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 SUSD5O60279 629 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 SIX6O95475 246 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CD14P08571 375 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CT45A8P0DMV1 189 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CT45A9P0DMV2 189 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 HOXB2P14652 356 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 S100A11P31949 105 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 FAUP35544 74 aaKnown RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 SLC25A1P53007 311 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 DLX5P56178 289 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CTXN1P60606 82 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 HLXQ14774 488 aaPredicted RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 ALG11Q2TAA5 492 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 CT45A2Q5DJT8 189 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 BCORP1Q8N888 145 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 GATSQ8NAP1 163 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 LSM14AQ8ND56 463 aaKnown RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 OR8K3Q8NH51 312 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 PHOSPHO2Q8TCD6 241 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 ASB12Q8WXK4 309 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 SIPA1Q96FS4 1042 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 GINS4Q9BRT9 223 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 ING1Q9UK53 422 aaPredicted RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 MOKQ9UQ07 419 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 PRELID1Q9Y255 219 aa14.24□□□□□ -0.13
NUP88-207ENST00000573584 TP53BP1Q12888 1972 aaPredicted RBP14.24□□□□□ -0.13
NUP88-207ENST00000573584 TRBV5-5A0A0J9YX44 114 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 MFSD2BA6NFX1 497 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 TVP23AA6NH52 213 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 OR6C65A6NJZ3 312 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 XRCC3O43542 346 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 RLN1P04808 185 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 HIST1H2ABP04908 130 aa14.23□□□□□ -0.13
NUP88-207ENST00000573584 HTRA3P83110 453 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms