RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 RSRC1Q96IZ7 334 aaKnown RBP11.97□□□□□ -0.49
RPAIN-213ENST00000573577 ZNF385AQ96PM9 386 aaKnown RBP11.97□□□□□ -0.49
RPAIN-213ENST00000573577 ALPK1Q96QP1 1244 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 CHID1Q9BWS9 393 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 HDHD5Q9BXW7 423 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 POLDIP3Q9BY77 421 aaKnown RBP11.97□□□□□ -0.49
RPAIN-213ENST00000573577 NDEL1Q9GZM8 345 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 CLEC4MQ9H2X3 399 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-213ENST00000573577 UPB1Q9UBR1 384 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 RCE1Q9Y256 329 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 POLQO75417 2590 aa11.97□□□□□ -0.49
RPAIN-213ENST00000573577 TRBV4-1A0A0J9YWV2 114 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 TCRBV3S1A0A5B6 114 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 EFCAB9A8MZ26 197 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 C11orf98E9PRG8 122 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 KRT33AO76009 404 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 OR2T5Q6IEZ7 315 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 NIPAL3Q6P499 406 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 TBPL2Q6SJ96 375 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 STAC2Q6ZMT1 411 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 TMPRSS11FQ6ZWK6 438 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 HDDC2Q7Z4H3 204 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 YTHDF3Q7Z739 585 aaKnown RBP11.96□□□□□ -0.49
RPAIN-213ENST00000573577 OAFQ86UD1 273 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 CDH24Q86UP0 819 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 GABRG1Q8N1C3 465 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 LRRC17Q8N6Y2 441 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 POMGNT2Q8NAT1 580 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 OR4K5Q8NGD3 323 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 OR2T29Q8NH02 315 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 WFIKKN1Q96NZ8 548 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
RPAIN-213ENST00000573577 MED18Q9BUE0 208 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 SLCO5A1Q9H2Y9 848 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 REEP1Q9H902 201 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 ASB6Q9NWX5 421 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 TAS2R5Q9NYW4 299 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 MALT1Q9UDY8 824 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 GPR52Q9Y2T5 361 aa11.96□□□□□ -0.49
RPAIN-213ENST00000573577 A0A1W2PRG6 482 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 SH3PXD2BA1X283 911 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 ZNF726A6NNF4 738 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 TNFRSF11BO00300 401 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 CASKO14936 926 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 TRAF3IP2O43734 574 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 OR10H3O60404 316 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 SLC43A1O75387 559 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 SERPINI2O75830 405 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 HPRP00739 348 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 ADAP00813 363 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 CST1P01037 141 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 PPP3CBP16298 524 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 PSMB1P20618 241 aaKnown RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 FUT4P22083 530 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 HMGA2P52926 109 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 PRPS1P60891 318 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 GABPB1Q06547 395 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 RPL18Q07020 188 aaKnown RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 ITGADQ13349 1161 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 FBXW10Q5XX13 1052 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 STEAP2Q8NFT2 490 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 KISS1RQ969F8 398 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 ADAD1Q96M93 576 aaKnown RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 OR10A4Q9H209 315 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 CCM2LQ9NUG4 571 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 ZNF226Q9NYT6 803 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 STX18Q9P2W9 335 aaKnown RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 PRSS50Q9UI38 385 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 HIF3AQ9Y2N7 669 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 SAMHD1Q9Y3Z3 626 aaKnown RBP11.95□□□□□ -0.5
RPAIN-213ENST00000573577 LYVE1Q9Y5Y7 322 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
RPAIN-213ENST00000573577 GNGT2O14610 69 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 BCL10O95999 233 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 HRGP04196 525 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 TSPAN19P0C672 248 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 MAKP20794 623 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 IL32P24001 234 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 NTF4P34130 210 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 AQP2P41181 271 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 GPR4P46093 362 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 SELENOPP49908 381 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 DAP3P51398 398 aaKnown RBP11.94□□□□□ -0.5
RPAIN-213ENST00000573577 TGFBR3Q03167 851 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 SEC23BQ15437 767 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 ALG10Q5BKT4 473 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 SFRP5Q5T4F7 317 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 ANKRD34AQ69YU3 496 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 SLC35D2Q76EJ3 337 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.94□□□□□ -0.5
RPAIN-213ENST00000573577 CXorf67Q86X51 503 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-213ENST00000573577 CDC20BQ86Y33 519 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 FAM46AQ96IP4 442 aaKnown RBP11.94□□□□□ -0.5
RPAIN-213ENST00000573577 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-213ENST00000573577 FUZQ9BT04 418 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 INIPQ9NRY2 104 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 TAS2R16Q9NYV7 291 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 CREBBPQ92793 2442 aa11.94□□□□□ -0.5
RPAIN-213ENST00000573577 OTOGQ6ZRI0 2925 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms