RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 IPMKQ8NFU5 416 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 OR2M7Q8NG81 312 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 OR5M8Q8NGP6 311 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 NUDCD2Q8WVJ2 157 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF75CPQ92670 426 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-214ENST00000572365 FAM162AQ96A26 154 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 MARK4Q96L34 752 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 SFXN2Q96NB2 322 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF285Q96NJ3 590 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 CHP1Q99653 195 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 UQCC2Q9BRT2 126 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 ERP44Q9BS26 406 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 WACQ9BTA9 647 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 DPH7Q9BTV6 452 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 C1orf50Q9BV19 199 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 RBM24Q9BX46 236 aaKnown RBP4.68□□□□□ -1.66
SF3B3-214ENST00000572365 GANQ9H2C0 597 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 HIPK2Q9H2X6 1198 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 ACKR4Q9NPB9 350 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 MYNNQ9NPC7 610 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 MRGBPQ9NV56 204 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 PARVAQ9NVD7 372 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 FAM153AQ9UHL3 310 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 PTBP2Q9UKA9 531 aaKnown RBP4.68□□□□□ -1.66
SF3B3-214ENST00000572365 PCNX3Q9H6A9 2034 aa4.68□□□□□ -1.66
SF3B3-214ENST00000572365 TRGV5A0A0B4J1U4 118 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 TRBV11-1A0A0K0K1C0 115 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 A0A1W2PS18 150 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 OR51F1A6NGY5 319 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SERINC4A6NH21 518 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 ANXA2P2A6NMY6 339 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 IQCF5A8MTL0 148 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 MIF4GDA9UHW6 222 aaKnown RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 FAM25AB3EWG3 89 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 FAM25CB3EWG5 89 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 FAM25GB3EWG6 89 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 WWP2O00308 870 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 BCKDKO14874 412 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SYNGR3O43761 229 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SRPX2O60687 465 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 OR6B1O95007 311 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 S100A6P06703 90 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 ANPEPP15144 967 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 EEF1B2P24534 225 aaKnown RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 BDKRB1P46663 353 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 GNG2P59768 71 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 NAA20P61599 178 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 STX3Q13277 289 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 DPYSL3Q14195 570 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 GRB7Q14451 532 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 PAFAH1B3Q15102 231 aaKnown RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 PDK3Q15120 406 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 UAP1Q16222 522 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 EXT1Q16394 746 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 C6orf52Q5T4I8 152 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 ZFP1Q6P2D0 407 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 IZUMO2Q6UXV1 221 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SERPINA9Q86WD7 417 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 LRRC6Q86X45 466 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SLC7A5P1Q8MH63 180 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 PQLC3Q8N755 202 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 TRIML2Q8N7C3 387 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 C3orf56Q8N813 242 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 OR5T3Q8NGG3 340 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 OR5K2Q8NHB8 316 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SETD6Q8TBK2 473 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 RAB3IL1Q8TBN0 382 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 TRUB1Q8WWH5 349 aaKnown RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 S100ZQ8WXG8 99 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 EXT2Q93063 718 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SPSB1Q96BD6 273 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 ANKRD9Q96BM1 317 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 JSRP1Q96MG2 331 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 TSGA13Q96PP4 275 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 FEVQ99581 238 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 COPS8Q99627 209 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 LPAR4Q99677 370 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 PSD2Q9BQI7 771 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 C1QTNF4Q9BXJ3 329 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 DEFB126Q9BYW3 111 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SHCBP1LQ9BZQ2 653 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SHARPINQ9H0F6 387 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 SLC25A51Q9H1U9 297 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 ZDHHC11Q9H8X9 412 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 TCF7L2Q9NQB0 619 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 C8orf4Q9NR00 106 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 INIPQ9NRY2 104 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 B4GALT7Q9UBV7 327 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 LGALS13Q9UHV8 139 aa4.67□□□□□ -1.66
SF3B3-214ENST00000572365 NOSIPQ9Y314 301 aaKnown RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 HEATR1Q9H583 2144 aaKnown RBP4.67□□□□□ -1.66
SF3B3-214ENST00000572365 ARPC4-TTLL3A0A0A6YYG9 625 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 TMEM120BA0PK00 339 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SNTNA6NMZ2 147 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 HAT1O14929 419 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 OR1I1O60431 355 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 ZNF354AO60765 605 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-214ENST00000572365 RDH16O75452 317 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 OR2J2O76002 312 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 AP2A1O95782 977 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms