RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NUDT17P0C025 328 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 MAGEB1P43366 347 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 RPS23P62266 143 aaKnown RBP16.99■□□□□ 0.31
CCDC40-206ENST00000572083 UBA52P62987 128 aaKnown RBP16.99■□□□□ 0.31
CCDC40-206ENST00000572083 TXNL4AP83876 142 aaKnown RBP16.99■□□□□ 0.31
CCDC40-206ENST00000572083 GALK2Q01415 458 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 MVKQ03426 396 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 RPS26P11Q5JNZ5 115 aaPredicted RBP16.99■□□□□ 0.31
CCDC40-206ENST00000572083 ACSM5Q6NUN0 579 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF621Q6ZSS3 439 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 OR4M2Q8NGB6 313 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF417Q8TAU3 575 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 C22orf15Q8WYQ4 148 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF587Q96SQ5 575 aaPredicted RBP16.99■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF747Q9BV97 191 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 SLC52A3Q9NQ40 469 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 P2RX2Q9UBL9 471 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 CHST2Q9Y4C5 530 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 PPIAL4AQ9Y536 164 aa16.99■□□□□ 0.31
CCDC40-206ENST00000572083 AIM2O14862 343 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 PLPP2O43688 288 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 TRAF3IP2O43734 574 aaPredicted RBP16.98■□□□□ 0.31
CCDC40-206ENST00000572083 CDC14BO60729 498 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 BCL10O95999 233 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 ANPEPP15144 967 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 B4GALT1P15291 398 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 CBLP22681 906 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 GIPRP48546 466 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 AQP5P55064 265 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 MRPS11P82912 194 aaKnown RBP16.98■□□□□ 0.31
CCDC40-206ENST00000572083 HOXC5Q00444 222 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 FXNQ16595 210 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 GLIPR1L2Q4G1C9 344 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 SHISA2Q6UWI4 295 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF813Q6ZN06 617 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 MGARPQ8TDB4 240 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 EMC6Q9BV81 110 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF385DQ9H6B1 395 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF224Q9NZL3 707 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 CORINQ9Y5Q5 1042 aa16.98■□□□□ 0.31
CCDC40-206ENST00000572083 AKAP8O43823 692 aaKnown RBP16.97■□□□□ 0.31
CCDC40-206ENST00000572083 GRPRP30550 384 aa16.97■□□□□ 0.31
CCDC40-206ENST00000572083 UFM1P61960 85 aa16.97■□□□□ 0.31
CCDC40-206ENST00000572083 NKPD1Q17RQ9 610 aa16.97■□□□□ 0.31
CCDC40-206ENST00000572083 TAAR8Q969N4 342 aa16.97■□□□□ 0.31
CCDC40-206ENST00000572083 PRDM4Q9UKN5 801 aa16.97■□□□□ 0.31
CCDC40-206ENST00000572083 DEAF1O75398 565 aaPredicted RBP16.96■□□□□ 0.31
CCDC40-206ENST00000572083 RAB36O95755 333 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 HLA-DOBP13765 273 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 ETFAP13804 333 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 CRISP3P54108 245 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 CCL8P80075 99 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 MFSD13AQ14CX5 517 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 LARS2Q15031 903 aaKnown RBP16.96■□□□□ 0.31
CCDC40-206ENST00000572083 DCAF12L2Q5VW00 463 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 C20orf196Q8IYI0 205 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 NANPQ8TBE9 248 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 RNF217Q8TC41 542 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 RAB39BQ96DA2 213 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 SLC6A13Q9NSD5 602 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 CALML5Q9NZT1 146 aa16.96■□□□□ 0.31
CCDC40-206ENST00000572083 ZNF346Q9UL40 294 aaKnown RBP16.96■□□□□ 0.31
CCDC40-206ENST00000572083 FZD7O75084 574 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 CLPTM1O96005 669 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 HPRP00739 348 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 LBPP18428 481 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 IL12AP29459 219 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 MVDP53602 400 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 RAB1AP62820 205 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 ZP4Q12836 540 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 FOXL1Q12952 345 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 RAB39AQ14964 217 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 FAM69AQ5T7M9 428 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 TREML4Q6UXN2 200 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 WDFY1Q8IWB7 410 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 UEVLDQ8IX04 471 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 SLC38A5Q8WUX1 472 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 TSPAN32Q96QS1 320 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 OR52E6Q96RD3 313 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 SPATA9Q9BWV2 254 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 NUF2Q9BZD4 464 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 DDX28Q9NUL7 540 aaKnown RBP16.95■□□□□ 0.3
CCDC40-206ENST00000572083 MED29Q9NX70 200 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 TAAR3PQ9P1P4 343 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 SLC7A8Q9UHI5 535 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 POFUT2Q9Y2G5 429 aa16.95■□□□□ 0.3
CCDC40-206ENST00000572083 WDR91A4D1P6 747 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 J3QLI3 93 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 PRSS23O95084 383 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 KRT75O95678 551 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 IGHV2-5P01817 119 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 ALDOCP09972 364 aaKnown RBP16.94■□□□□ 0.3
CCDC40-206ENST00000572083 MYZAPP0CAP1 466 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 HKR1P10072 659 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 ARAFP10398 606 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 CRATP43155 626 aa16.94■□□□□ 0.3
CCDC40-206ENST00000572083 H1FNTQ75WM6 255 aaPredicted RBP16.94■□□□□ 0.3
CCDC40-206ENST00000572083 ZNF771Q7L3S4 317 aaPredicted RBP16.94■□□□□ 0.3
CCDC40-206ENST00000572083 ZNF584Q8IVC4 421 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms