RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 MELKQ14680 651 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 USF2Q15853 346 aaPredicted RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 C5orf46Q6UWT4 87 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 ESPNLQ6ZVH7 1005 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 DNTTIP1Q9H147 329 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 CIB4A0PJX0 185 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 LINC01553A4QN01 128 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 B4DXG7 233 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 FCMRO60667 390 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 RPS15P62841 145 aaKnown RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 NR0B2Q15466 257 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 MEP1BQ16820 701 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 EID2Q8N6I1 236 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 OR51D1Q8NGF3 324 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 DVL3Q92997 716 aaPredicted RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 RRNAD1Q96FB5 475 aaKnown RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 SPIN2AQ99865 258 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 SPIN2BQ9BPZ2 258 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 NXF5Q9H1B4 397 aaKnown RBP14.15□□□□□ -0.14
CIITA-204ENST00000570546 ACKR4Q9NPB9 350 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 SHANK3Q9BYB0 1731 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 NUP205Q92621 2012 aa14.15□□□□□ -0.14
CIITA-204ENST00000570546 H3BQ06 376 aaPredicted RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 SOX18P35713 384 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 RAE1P78406 368 aaKnown RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 MEX3BQ6ZN04 569 aaKnown RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 FAM3DQ96BQ1 224 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 SFXN2Q96NB2 322 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ASB16Q96NS5 453 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ARHGAP9Q9BRR9 750 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 VN1R3Q9BXE9 311 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 SMIM3Q9BZL3 60 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 SLC23A2Q9UGH3 650 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 EMC9Q9Y3B6 208 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 A6NLC8 198 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ZFAND5O76080 213 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 KIAA0040Q15053 153 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 GPR157Q5UAW9 335 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 RNF165Q6ZSG1 346 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 OR13C9Q8NGT0 318 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 OR6F1Q8NGZ6 308 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 Q96M85 177 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 C1orf198Q9H425 327 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 RPS10P5Q9NQ39 176 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 KCNE1BA0A087WTH5 132 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 LOC100289279A0A1B0GTE1 492 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ANKRD34BA5PLL1 514 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 M0R082 166 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 WDPCPO95876 746 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ZNF28P17035 718 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 EEF1A2Q05639 463 aaKnown RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 BTLAQ7Z6A9 289 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 GOT1L1Q8NHS2 421 aaPredicted RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 GLYATL2Q8WU03 294 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 LINC00615Q96LM1 132 aaPredicted RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 SMCO3A2RU48 225 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 HOXB5P09067 269 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 EPHA1P21709 976 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 FOLR3P41439 243 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ADPRHP54922 357 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 TAS2R46P59540 309 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ACTBL2Q562R1 376 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 CMTM1Q8IZ96 169 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ZFAND1Q8TCF1 268 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 DOK1Q99704 481 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 MAP3K3Q99759 626 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 CTRCQ99895 268 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 MED18Q9BUE0 208 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 FGF20Q9NP95 211 aaPredicted RBP14.14□□□□□ -0.15
CIITA-204ENST00000570546 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
CIITA-204ENST00000570546 ITGBL1O95965 494 aaPredicted RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 WNT3P56703 355 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 TAS2R20P59543 309 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 BDH1Q02338 343 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 SEC22AQ96IW7 307 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 SLIRPQ9GZT3 109 aaKnown RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 EMC3Q9P0I2 261 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 MISPQ8IVT2 679 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 OR13H1Q8NG92 308 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 FAM174AQ8TBP5 190 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 MCOLN1Q9GZU1 580 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 M0QYG6 137 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 SULT1C2O00338 296 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 P2RY10O00398 339 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 DPM1O60762 260 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 EVX1P49640 407 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 DGCR2P98153 550 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 BAK1Q16611 211 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 ASTLQ6HA08 431 aaPredicted RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 HEPHL1Q6MZM0 1159 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 RAB11FIP2Q7L804 512 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 MIB2Q96AX9 1013 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 TSPAN10Q9H1Z9 355 aaPredicted RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 PTRH2Q9Y3E5 179 aaKnown RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 SLC22A23A1A5C7 686 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 HIST1H1CP16403 213 aaKnown RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 MRPL21Q7Z2W9 205 aaKnown RBP14.13□□□□□ -0.15
CIITA-204ENST00000570546 MARCH3Q86UD3 253 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 LILRB2Q8N423 598 aa14.13□□□□□ -0.15
CIITA-204ENST00000570546 OR5B12Q96R08 314 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms