RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 C3orf56Q8N813 242 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 FAM169BQ8N8A8 192 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 OR9I1Q8NGQ6 314 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 FGFBP3Q8TAT2 258 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 GTF3AQ92664 365 aaKnown RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 FAHD2AQ96GK7 314 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 TXNDC15Q96J42 360 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF317Q96PQ6 595 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 TSPAN32Q96QS1 320 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 PAIP2Q9BPZ3 127 aaKnown RBP10.36□□□□□ -0.75
CAPN3-220ENST00000569827 SPATA9Q9BWV2 254 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 TPT1P8Q9HAU6 139 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 B3GNT2Q9NY97 397 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 DOCK11Q5JSL3 2073 aa10.36□□□□□ -0.75
CAPN3-220ENST00000569827 A0A096LPI6 279 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 A0A1B0GWA3 101 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 A0A1W2PPW3 197 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 VSTM5A8MXK1 200 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 MS4A18H0YCH9 400 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 AIM2O14862 343 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 MSMBP08118 114 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 NQO1P15559 274 aaKnown RBP10.35□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF14P17017 642 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-220ENST00000569827 POU3F1Q03052 451 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-220ENST00000569827 STX3Q13277 289 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 CAMK2DQ13557 499 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 RAB39AQ14964 217 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 GSG1Q2KHT4 349 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 MS4A18Q3C1V0 323 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 KRT71Q3SY84 523 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 GLIPR1L2Q4G1C9 344 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 GKAP1Q5VSY0 366 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-220ENST00000569827 NXNQ6DKJ4 435 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 OGFOD2Q6N063 350 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 PEG10Q86TG7 708 aaKnown RBP10.35□□□□□ -0.75
CAPN3-220ENST00000569827 UEVLDQ8IX04 471 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 PIK3C3Q8NEB9 887 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 GCDHQ92947 438 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF75AQ96N20 296 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 ZBTB18Q99592 522 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 RPS6KB2Q9UBS0 482 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 DUSP13Q9UII6 198 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 SPEF1Q9Y4P9 236 aa10.35□□□□□ -0.75
CAPN3-220ENST00000569827 BIRC5O15392 142 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 CLPTM1O96005 669 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 FAM157BP0CG42 384 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 CCL2P13500 99 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF35P13682 527 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 HOXB1P14653 301 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 EPHA1P21709 976 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 RBMXP38159 391 aaKnown RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ERVS71-1P61550 626 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 MVKQ03426 396 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 GLO1Q04760 184 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 TRMT5Q32P41 509 aaKnown RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 C6orf10Q5SRN2 563 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 FAM69AQ5T7M9 428 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF584Q8IVC4 421 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 C20orf196Q8IYI0 205 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 C10orf111Q8N326 155 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 MIER2Q8N344 545 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 PAQR4Q8N4S7 273 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ANKRD42Q8N9B4 389 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 OR51F2Q8NH61 342 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 AENQ8WTP8 325 aaKnown RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 RDH5Q92781 318 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 MOGAT1Q96PD6 335 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 SLC6A7Q99884 636 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 WFDC6Q9BQY6 131 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ROPN1BQ9BZX4 212 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 RACGAP1Q9H0H5 632 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 CENPHQ9H3R5 247 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ROPN1Q9HAT0 212 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 KCNK9Q9NPC2 374 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 CALML5Q9NZT1 146 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 KLHL14Q9P2G3 628 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 HAO1Q9UJM8 370 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 FBXO9Q9UK97 447 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 PCDHB10Q9UN67 800 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 GRIP1Q9Y3R0 1128 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 NOX1Q9Y5S8 564 aa10.34□□□□□ -0.75
CAPN3-220ENST00000569827 V9GYY5 206 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 PRKDCP78527 4128 aaKnown RBP10.34□□□□□ -0.75
CAPN3-220ENST00000569827 A0A0G2JPF8 293 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 HNRNPCL2B2RXH8 293 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 HNRNPCL3B7ZW38 293 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 C11orf98E9PRG8 122 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 TPST1O60507 370 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 HNRNPCL1O60812 293 aaKnown RBP10.33□□□□□ -0.76
CAPN3-220ENST00000569827 RP2O75695 350 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 HNRNPCL4P0DMR1 293 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 PCMT1P22061 227 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 ACHEP22303 614 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 PAX7P23759 505 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms