RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	CLDN14	O95500	239 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CNOT4	O95628	575 aa	Known RBP	13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OR3A2	P47893	321 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RPS6KA3	P51812	740 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RCN1	Q15293	331 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RFX4	Q33E94	735 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FAM205BP	Q63HN1	556 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	HMBOX1	Q6NT76	420 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	VWA1	Q6PCB0	445 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CD300LD	Q6UXZ3	194 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	DPY19L2P2	Q6ZN68	376 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	BEND4	Q6ZU67	534 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NUFIP2	Q7Z417	695 aa	Known RBP	13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TMEM179B	Q7Z7N9	219 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	UBE2J2	Q8N2K1	259 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CLDN22	Q8N7P3	220 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	POMGNT2	Q8NAT1	580 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZNF385A	Q96PM9	386 aa	Known RBP	13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GPA33	Q99795	319 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TEX12	Q9BXU0	123 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	POLDIP3	Q9BY77	421 aa	Known RBP	13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TXNIP	Q9H3M7	391 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MCCC2	Q9HCC0	563 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	B3GAT2	Q9NPZ5	323 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GRHPR	Q9UBQ7	328 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	UPB1	Q9UBR1	384 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OAZ3	Q9UMX2	235 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	POFUT2	Q9Y2G5	429 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ORC6	Q9Y5N6	252 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CDH10	Q9Y6N8	788 aa		13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PHF3	Q92576	2039 aa	Known RBP	13.22	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MYO18B	Q8IUG5	2567 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499		A6NIZ1	184 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SAC3D1	A6NKF1	404 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FAM90A27P	A6NNH2	459 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499		H3BN98	237 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TRAF3IP2	O43734	574 aa	Predicted RBP	13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	CD14	P08571	375 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	NR2C1	P13056	603 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	HLA-DOB	P13765	273 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PRKACG	P22612	351 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ASCL1	P50553	236 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	BID	P55957	195 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RAP1B	P61224	184 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RAP1A	P62834	184 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GPR139	Q6DWJ6	353 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZNF620	Q6ZNG0	422 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	LUZP2	Q86TE4	346 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GPR137C	Q8N3F9	429 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ZIC4	Q8N9L1	334 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OR6X1	Q8NH79	312 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	TEX47	Q8TBZ9	253 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	EME1	Q96AY2	570 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RBM4B	Q9BQ04	359 aa	Known RBP	13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	C9orf16	Q9BUW7	83 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	IFT27	Q9BW83	186 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	RBM4	Q9BWF3	364 aa	Known RBP	13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	GABARAPL1	Q9H0R8	117 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	SLCO5A1	Q9H2Y9	848 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	OR52D1	Q9H346	318 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MED29	Q9NX70	200 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	ELOVL5	Q9NYP7	299 aa		13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.21	□□□□□ -0.29
KLHDC4-223	ENST00000568499	MYO7B	Q6PIF6	2116 aa		13.21	□□□□□ -0.3
KLHDC4-223	ENST00000568499	MPDZ	O75970	2070 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SLC35F4	A4IF30	521 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	WIPF3	A6NGB9	483 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499		A8MXE2	369 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CENPBD1	B2RD01	187 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	XKRY	O14609	159 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	IDH3B	O43837	385 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	IGHG1	P01857	330 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	OSM	P13725	252 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ANPEP	P15144	967 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CDH2	P19022	906 aa	Predicted RBP	13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	NOS3	P29474	1203 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	CLRN1	P58418	232 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	RPL27	P61353	136 aa	Known RBP	13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ERVK-25	P63136	954 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TOP3A	Q13472	1001 aa	Predicted RBP	13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ACKR1	Q16570	336 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	FBXW9	Q5XUX1	488 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	FAHD1	Q6P587	224 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TFAP2E	Q6VUC0	442 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	LIX1L	Q8IVB5	337 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	HS3ST5	Q8IZT8	346 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ZNF610	Q8N9Z0	462 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	OR6N1	Q8NGY5	312 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	FNDC8	Q8TC99	324 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	ZNF566	Q969W8	418 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SLC25A44	Q96H78	314 aa	Predicted RBP	13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	TXNDC15	Q96J42	360 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	LRR1	Q96L50	414 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	SAMD8	Q96LT4	415 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	GPX7	Q96SL4	187 aa	Predicted RBP	13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	NIPSNAP1	Q9BPW8	284 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	KATNB1	Q9BVA0	655 aa		13.2	□□□□□ -0.3
KLHDC4-223	ENST00000568499	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms