RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 SLC43A2Q8N370 569 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 LRRC75AQ8NAA5 344 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CYB561A3Q8NBI2 242 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 FAM98AQ8NCA5 519 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 LSM14AQ8ND56 463 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 ZNF540Q8NDQ6 660 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 SDR9C7Q8NEX9 313 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 TSPAN14Q8NG11 270 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 OR52E2Q8NGJ4 325 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 OR4K13Q8NH42 304 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 RASD2Q96D21 266 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 Q96M85 177 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 SLX1AQ9BQ83 275 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CHST11Q9NPF2 352 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CMC2Q9NRP2 79 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 SCN3BQ9NY72 215 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 MRPL39Q9NYK5 338 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 MRPS18CQ9Y3D5 142 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 HDGFL3Q9Y3E1 203 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 SPEF1Q9Y4P9 236 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PCDHGA9Q9Y5G4 932 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 GTF3C1Q12789 2109 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 GJE1A6NN92 205 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 K7EM74 188 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 HPNP05981 417 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CD14P08571 375 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CCDC159P0C7I6 412 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 HIST1H1CP16403 213 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 GFRA1P56159 465 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CLDN20P56880 219 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PSMA6P60900 246 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 EFNB1P98172 346 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PIGFQ07326 219 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PUDPQ08623 228 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 FAM209AQ5JX71 171 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 RNFT1Q5M7Z0 435 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PLBD1Q6P4A8 553 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 Q6ZNX1 250 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 TMPPEQ6ZT21 453 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 AHSA2Q719I0 299 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 CPOQ8IVL8 374 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 FAM109AQ8N4B1 249 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 TMEM99Q8N816 258 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 ABTB1Q969K4 478 aaPredicted RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 KLHL15Q96M94 604 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 Q96MT0 163 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 ZNF582Q96NG8 517 aaPredicted RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 GPX7Q96SL4 187 aaPredicted RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 YTHDF1Q9BYJ9 559 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 DEFB127Q9H1M4 99 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 EXO5Q9H790 373 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 MED20Q9H944 212 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PLGRKTQ9HBL7 147 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 HINT3Q9NQE9 182 aaKnown RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 INIPQ9NRY2 104 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 PAK1IP1Q9NWT1 392 aaPredicted RBP9.37□□□□□ -0.91
TCF4-236ENST00000567880 GRHPRQ9UBQ7 328 aa9.37□□□□□ -0.91
TCF4-236ENST00000567880 A0A0J9YW62 118 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 CCDC160A6NGH7 325 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 TFECO14948 347 aaPredicted RBP9.36□□□□□ -0.91
TCF4-236ENST00000567880 IFNGP01579 166 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 ITGB2P05107 769 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 TSPAN19P0C672 248 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 HLA-DOBP13765 273 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 ZNF24P17028 368 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 ZNF3P17036 446 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 KLK2P20151 261 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 UCNP55089 124 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 CXCR4P61073 352 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 SRYQ05066 204 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.36□□□□□ -0.91
TCF4-236ENST00000567880 CRMP1Q14194 572 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 ZNF169Q14929 603 aaPredicted RBP9.36□□□□□ -0.91
TCF4-236ENST00000567880 SLC10A1Q14973 349 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 TBR1Q16650 682 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 HYAL4Q2M3T9 481 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 IGFL3Q6UXB1 125 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 UNQ6494/PRO21346Q6UXR6 183 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 NCCRP1Q6ZVX7 275 aaPredicted RBP9.36□□□□□ -0.91
TCF4-236ENST00000567880 CXXC5Q7LFL8 322 aaKnown RBP9.36□□□□□ -0.91
TCF4-236ENST00000567880 GPAT4Q86UL3 456 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 SCAIQ8N9R8 606 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 NAXEQ8NCW5 288 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 BBS1Q8NFJ9 593 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 ZNF566Q969W8 418 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 MIB2Q96AX9 1013 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 TSPAN32Q96QS1 320 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 NMNAT3Q96T66 252 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 FN3KQ9H479 309 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 LDAHQ9H6V9 325 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 TPRKBQ9Y3C4 175 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 LIPGQ9Y5X9 500 aa9.36□□□□□ -0.91
TCF4-236ENST00000567880 IGHV3-15A0A0B4J1V0 119 aa9.35□□□□□ -0.91
TCF4-236ENST00000567880 MED19A0JLT2 244 aaPredicted RBP9.35□□□□□ -0.91
TCF4-236ENST00000567880 ZNF814B7Z6K7 855 aa9.35□□□□□ -0.91
TCF4-236ENST00000567880 PRR23D1E9PI22 279 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms