RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 A0A087WUU8 490 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ARPC4-TTLL3A0A0A6YYG9 625 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 TRAPPC13A5PLN9 417 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 FAM172BPA6NC97 362 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ANTXRLA6NF34 631 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 FABP12A6NFH5 140 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 LRRC72A6NJI9 287 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 WASHC1A8K0Z3 465 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 RAB27BO00194 218 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SURF4O15260 269 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 RGS5O15539 181 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 PLOD3O60568 738 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SLC19A2O60779 497 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 STX11O75558 287 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 IFNGP01579 166 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 IGLV3-19P01714 112 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ATP1B1P05026 303 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 HBQ1P09105 142 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SMIM10L1P0DMW3 83 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 CPN2P22792 545 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 S100A1P23297 94 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 LMO1P25800 156 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 PSMB5P28074 263 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ATP6V1E1P36543 226 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 DDOSTP39656 456 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 RBM34P42696 430 aaKnown RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 PSMD4P55036 377 aaKnown RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 RAB25P57735 213 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 OR2B6P58173 313 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 FUT5Q11128 374 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 BIKQ13323 160 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 TAB1Q15750 504 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 BCL2A1Q16548 175 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SRSF7Q16629 238 aaKnown RBP eCLIP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 PGGHGQ32M88 737 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 GLYR1Q49A26 553 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 HES3Q5TGS1 186 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 AADACL4Q5VUY2 407 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 MFSD12Q6NUT3 480 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF613Q6PF04 617 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF620Q6ZNG0 422 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 MMP21Q8N119 569 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 OR8H2Q8N162 312 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF619Q8N2I2 560 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SDR16C5Q8N3Y7 309 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 FRMD1Q8N878 549 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 PNLDC1Q8NA58 520 aaKnown RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 OR4D11Q8NGI4 311 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 OR9A2Q8NGT5 310 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 HTRA1Q92743 480 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 OTULINQ96BN8 352 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 TM4SF19Q96DZ7 209 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 GIMAP5Q96F15 307 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SLC41A3Q96GZ6 507 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ZC3HAV1LQ96H79 300 aaKnown RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SMIM10Q96HG1 83 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 RITA1Q96K30 269 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 OR2A14Q96R47 310 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 CD180Q99467 661 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 MCHR1Q99705 422 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 CTRCQ99895 268 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SRRQ9GZT4 340 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF350Q9GZX5 532 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 MBNL1Q9NR56 388 aaKnown RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 TXNL4BQ9NX01 149 aaKnown RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 HAO2Q9NYQ3 351 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 TAS2R16Q9NYV7 291 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 C5AR2Q9P296 337 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 FBXW2Q9UKT8 454 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 DAPP1Q9UN19 280 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 C19orf53Q9UNZ5 99 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 KCNK6Q9Y257 313 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF443Q9Y2A4 671 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 CAB39Q9Y376 341 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 WDR45Q9Y484 360 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 PCYT1BQ9Y5K3 369 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 SPIN1Q9Y657 262 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-217ENST00000567817 V9GYH0 126 aa4.81□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3DA0A087WVF3 549 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3IA0A087WXS9 549 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3EA0A087X179 549 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 KIR2DS5A0A0G2JLQ3 304 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 A0A0G2JNG1 304 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 A0A1W2PQF6 199 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CCDC182A6NF36 153 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ANKRD61A6NGH8 418 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 OR52A4PA6NMU1 304 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 C2orf74A8MZ97 194 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FAM25AB3EWG3 89 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FAM25CB3EWG5 89 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FAM25GB3EWG6 89 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3LB9A6J9 549 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 KIR2DS3K7RE56 304 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CASKO14936 926 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CCNKO75909 580 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SNAPC5O75971 98 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CDRT1O95170 752 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SERPINA3P01011 423 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms