RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CRIM1Q9NZV1 1036 aa14.12□□□□□ -0.15
RAB40C-208ENST00000564703 HECTD1Q9ULT8 2610 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 UTP20O75691 2785 aaKnown RBP14.11□□□□□ -0.15
RAB40C-208ENST00000564703 TRBV4-1A0A0J9YWV2 114 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 SLC35F4A4IF30 521 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 OR10H3O60404 316 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 CST1P01037 141 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 F13BP05160 661 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 IFNGR1P15260 489 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 MAKP20794 623 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 IGHV1-2P23083 117 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 EDNRAP25101 427 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 SSTR2P30874 369 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 AQP2P41181 271 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 BIDP55957 195 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 PRPS1P60891 318 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 LSM11P83369 360 aaKnown RBP eCLIP14.11□□□□□ -0.15
RAB40C-208ENST00000564703 RPL18Q07020 188 aaKnown RBP14.11□□□□□ -0.15
RAB40C-208ENST00000564703 FBXW10Q5XX13 1052 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 OR2T5Q6IEZ7 315 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 OR7E24Q6IFN5 339 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 HMBOX1Q6NT76 420 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 HDDC2Q7Z4H3 204 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 OR6N1Q8NGY5 312 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 OR2T29Q8NH02 315 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 HSD17B8Q92506 261 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 MUCL1Q96DR8 90 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 RSRC1Q96IZ7 334 aaKnown RBP14.11□□□□□ -0.15
RAB40C-208ENST00000564703 TXNDC15Q96J42 360 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 TNFRSF13CQ96RJ3 184 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 EMC6Q9BV81 110 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 LINC00470Q9BZP3 86 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 ACTR6Q9GZN1 396 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 REEP1Q9H902 201 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 MED29Q9NX70 200 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 TAS2R16Q9NYV7 291 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.11□□□□□ -0.15
RAB40C-208ENST00000564703 MALT1Q9UDY8 824 aa14.11□□□□□ -0.15
RAB40C-208ENST00000564703 SH3PXD2BA1X283 911 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 MCIDASD6RGH6 385 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ZNF587BE7ETH6 402 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 TRAF3IP2O43734 574 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 LYZL6O75951 148 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 CDH2P19022 906 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 MPGP29372 298 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 RPL4P36578 427 aaKnown RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 MAGEA2P43356 314 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 GPR4P46093 362 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 HMGA2P52926 109 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ZBED5Q49AG3 693 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ALG10Q5BKT4 473 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 CARD17Q5XLA6 110 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ASRGL1Q7L266 308 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 P2RY8Q86VZ1 359 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 MEX3DQ86XN8 651 aaKnown RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ADGRG5Q8IZF4 528 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ZNF433Q8N7K0 673 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 ZC3HAV1LQ96H79 300 aaKnown RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 FAM46AQ96IP4 442 aaKnown RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 LRR1Q96L50 414 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 OR2M2Q96R28 347 aa14.1□□□□□ -0.15
RAB40C-208ENST00000564703 STX18Q9P2W9 335 aaKnown RBP14.1□□□□□ -0.15
RAB40C-208ENST00000564703 FLNBO75369 2602 aaKnown RBP14.09□□□□□ -0.15
RAB40C-208ENST00000564703 CLOCKO15516 846 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 ZNF432O94892 652 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 CCNB2O95067 398 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 HOXC12P31275 282 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 ERFP50548 548 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 DAP3P51398 398 aaKnown RBP14.09□□□□□ -0.15
RAB40C-208ENST00000564703 CAMK2DQ13557 499 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 DAZAP2Q15038 168 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-208ENST00000564703 SEC23BQ15437 767 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 TSC22D1Q15714 1073 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 C9orf135Q5VTT2 229 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 ALKBH2Q6NS38 261 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 SSX8Q7RTT4 187 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 OR6X1Q8NH79 312 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 MOSPD2Q8NHP6 518 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 GNPDA2Q8TDQ7 276 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 ZNF566Q969W8 418 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 S100PBPQ96BU1 408 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 C14orf79Q96F83 325 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 SLC25A44Q96H78 314 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-208ENST00000564703 NGBQ9NPG2 151 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 HIF3AQ9Y2N7 669 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 SAMHD1Q9Y3Z3 626 aaKnown RBP14.09□□□□□ -0.15
RAB40C-208ENST00000564703 ALPK2Q86TB3 2170 aa14.09□□□□□ -0.15
RAB40C-208ENST00000564703 TRAV27A0A087WT01 109 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 TCRBV3S1A0A5B6 114 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 UNC119BA6NIH7 251 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 M0R3G1 203 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 UPK3AO75631 287 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 RAD51DO75771 328 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 OMPP47874 163 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 ARHGDIAP52565 204 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 CTXN1P60606 82 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 ROR2Q01974 943 aaKnown RBP14.08□□□□□ -0.16
RAB40C-208ENST00000564703 TLE4Q04727 773 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 GK3PQ14409 553 aa14.08□□□□□ -0.16
RAB40C-208ENST00000564703 STK11Q15831 433 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms