RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 GLP1RP43220 463 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 PRMT2P55345 433 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 PJVKQ0ZLH3 352 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 GRB7Q14451 532 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 ATP6AP1Q15904 470 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 TP53I3Q53FA7 332 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 C5orf47Q569G3 176 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 LRRC10Q5BKY1 277 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 LY6G6FQ5SQ64 297 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 FAM71F2Q6NXP2 309 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 BLOC1S2Q6QNY1 142 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 FAM228AQ86W67 206 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 LRRC75A-AS1Q8N1F1 130 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 OR4K14Q8NGD5 310 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 FRZBQ92765 325 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 ASB9Q96DX5 294 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 PAGE5Q96GU1 130 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 NPY6RQ99463 290 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 SIAEQ9HAT2 523 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 ELOVL3Q9HB03 270 aa2.48□□□□□ -2.01
UBR1-205ENST00000564540 AK6Q9Y3D8 172 aaKnown RBP2.48□□□□□ -2.01
UBR1-205ENST00000564540 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
UBR1-205ENST00000564540 MROH7-TTC4A0A0A0MT08 1334 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 GOLGA6L7A0A1B0GV03 622 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ARHGEF35A5YM69 484 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ERICH4A6NGS2 130 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 COLCA2A8K830 154 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 H0YIV9 168 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 HIP1O00291 1037 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ARPC3O15145 178 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ZSCAN12O43309 604 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 LRATO95237 230 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 NT5EP21589 574 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 CALCRP30988 508 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 SRSF5Q13243 272 aaKnown RBP2.47□□□□□ -2.01
UBR1-205ENST00000564540 KIAA0087Q14695 138 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 TATDN3Q17R31 274 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 TMEM183BQ1AE95 376 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 EXOC3L2Q2M3D2 409 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 GGTA1PQ4G0N0 100 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 OR2G6Q5TZ20 316 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 GPR157Q5UAW9 335 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 SLC26A11Q86WA9 606 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 PCP2Q8IVA1 136 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 VSTM4Q8IW00 320 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 TMEM183AQ8IXX5 376 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ZNF683Q8IZ20 524 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 TRMT10AQ8TBZ6 339 aaKnown RBP2.47□□□□□ -2.01
UBR1-205ENST00000564540 SPRYD4Q8WW59 207 aaPredicted RBP2.47□□□□□ -2.01
UBR1-205ENST00000564540 PLIN2Q99541 437 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 SPIN2AQ99865 258 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 SPIN2BQ9BPZ2 258 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 TMEM43Q9BTV4 400 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 RNF167Q9H6Y7 350 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ETNK2Q9NVF9 386 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 RAB20Q9NX57 234 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 QPCTLQ9NXS2 382 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 ZNF226Q9NYT6 803 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 CLCF1Q9UBD9 225 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 SLC25A15Q9Y619 301 aa2.47□□□□□ -2.01
UBR1-205ENST00000564540 TET2Q6N021 2002 aaPredicted RBP2.47□□□□□ -2.01
UBR1-205ENST00000564540 IGLV11-55A0A075B6I3 123 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 ARPC4-TTLL3A0A0A6YYG9 625 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 SERTM2A0A1B0GWG4 89 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 METTL21EPA6NDL7 271 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 FAM25EA8MYX2 175 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 CD5LO43866 347 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 CTDNEP1O95476 244 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RHOXF2BP0C7M4 288 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 NCF2P19878 526 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 CASQ1P31415 396 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RFC4P35249 363 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 ARRB1P49407 418 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 CEBPDP49716 269 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 ATP5IP56385 69 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 RPL23AP62750 156 aaKnown RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 CSTF1Q05048 431 aaKnown RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 BST1Q10588 318 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 IFT88Q13099 833 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RCN1Q15293 331 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 PPP1R7Q15435 360 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RFX4Q33E94 735 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 PARP15Q460N3 678 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 ARMC12Q5T9G4 340 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 PRAMEF20Q5VT98 475 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 Q6ZN92 141 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 ZNF836Q6ZNA1 936 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 Q6ZPB1 254 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 CDR2LQ86X02 465 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 NBPF5PQ86XG9 351 aaPredicted RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 OR2L13Q8N349 312 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 STXBP6Q8NFX7 210 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 OR5D13Q8NGL4 314 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RAB3IL1Q8TBN0 382 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 HTR3CQ8WXA8 447 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RASD2Q96D21 266 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 CMTM7Q96FZ5 175 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 COQ2Q96H96 371 aa2.46□□□□□ -2.02
UBR1-205ENST00000564540 RIOK1Q9BRS2 568 aaKnown RBP2.46□□□□□ -2.02
UBR1-205ENST00000564540 ZNF2Q9BSG1 426 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms