RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TSTQ16762 297 aaKnown RBP16.22■□□□□ 0.19
COMMD4-208ENST00000563220 ARIH2OSQ8N7S6 290 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 ZNF485Q8NCK3 441 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 FNDC8Q8TC99 324 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 RPL3LQ92901 407 aaKnown RBP16.22■□□□□ 0.19
COMMD4-208ENST00000563220 BORCS5Q969J3 196 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 NXPE2Q96DL1 559 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 OR5B2Q96R09 309 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 TXNIPQ9H3M7 391 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 CHST11Q9NPF2 352 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 RPRD1BQ9NQG5 326 aaKnown RBP16.22■□□□□ 0.19
COMMD4-208ENST00000563220 ALKBH4Q9NXW9 302 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 ABI3Q9P2A4 366 aa16.22■□□□□ 0.19
COMMD4-208ENST00000563220 TRABD2BA6NFA1 517 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 C12orf71A8MTZ7 269 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 FAM171A2A8MVW0 826 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 DCTN6O00399 190 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 GTF2E2P29084 291 aaKnown RBP16.21■□□□□ 0.19
COMMD4-208ENST00000563220 CASRP41180 1078 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 DIO1P49895 249 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 SLC25A1P53007 311 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 WNT4P56705 351 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 LSM3P62310 102 aaKnown RBP16.21■□□□□ 0.19
COMMD4-208ENST00000563220 FOXO1Q12778 655 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 PON3Q15166 354 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 OR1C1Q15619 314 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 SSX1Q16384 188 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 RAET1LQ5VY80 246 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 ACBD7Q8N6N7 88 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 ZNF519Q8TB69 540 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 SLC25A43Q8WUT9 341 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-208ENST00000563220 GATAD2BQ8WXI9 593 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 THAP4Q8WY91 577 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 TM9SF4Q92544 642 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 TBX5Q99593 518 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 HES7Q9BYE0 225 aa16.21■□□□□ 0.19
COMMD4-208ENST00000563220 DCDC2BA2VCK2 349 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 ARHGEF9O43307 516 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SCG5P05408 212 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 FKBP2P26885 142 aaKnown RBP16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SRD5A2P31213 254 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 PYCR1P32322 319 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 ACVR1BP36896 505 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 CLK1P49759 484 aaKnown RBP16.2■□□□□ 0.18
COMMD4-208ENST00000563220 TLE3Q04726 772 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SPCS2Q15005 226 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 LINC01590Q5TEZ4 76 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SMPDL3BQ92485 455 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 PPP1R14BQ96C90 147 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 C5orf34Q96MH7 638 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 TIMP4Q99727 224 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 PALMDQ9NP74 551 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 CNTRLQ7Z7A1 2325 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 BCL10O95999 233 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 IGHMP01871 453 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 GADD45AP24522 165 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 P2RY4P51582 365 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SOX8P57073 446 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 OR2B6P58173 313 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 B3GALT5-AS1P59052 145 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 LGALS3BPQ08380 585 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 CLN3Q13286 438 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 C1DQ13901 141 aaKnown RBP16.2■□□□□ 0.18
COMMD4-208ENST00000563220 TOMM20Q15388 145 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SLC35D3Q5M8T2 416 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 C19orf48Q6RUI8 117 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 LYPD4Q6UWN0 246 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 YRDCQ86U90 279 aaKnown RBP16.2■□□□□ 0.18
COMMD4-208ENST00000563220 ATCAYQ86WG3 371 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 ZNF248Q8NDW4 579 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 OR10H4Q8NGA5 316 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 SRA1Q9HD15 236 aaKnown RBP16.2■□□□□ 0.18
COMMD4-208ENST00000563220 ZFP64Q9NPA5 681 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 B3GALT5Q9Y2C3 310 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 HDGFL3Q9Y3E1 203 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 MED12Q93074 2177 aa16.2■□□□□ 0.18
COMMD4-208ENST00000563220 ALPK2Q86TB3 2170 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 GLCEO94923 617 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 TFP02787 698 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 HCCSP53701 268 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 RRADP55042 308 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 RUNX1T1Q06455 604 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 MLLT11Q13015 90 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-208ENST00000563220 GGTLC2Q14390 218 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 MELKQ14680 651 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 RSPO4Q2I0M5 234 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-208ENST00000563220 TMPPEQ6ZT21 453 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 WDFY1Q8IWB7 410 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 OR6V1Q8N148 313 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 PIGQQ9BRB3 760 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 ARHGAP9Q9BRR9 750 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 OR51E2Q9H255 320 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 SYT4Q9H2B2 425 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 GALNT8Q9NY28 637 aa16.19■□□□□ 0.18
COMMD4-208ENST00000563220 A0A1W2PRG6 482 aa16.18■□□□□ 0.18
COMMD4-208ENST00000563220 ZNF814B7Z6K7 855 aa16.18■□□□□ 0.18
COMMD4-208ENST00000563220 CCRL2O00421 344 aa16.18■□□□□ 0.18
COMMD4-208ENST00000563220 ZNF17P17021 662 aa16.18■□□□□ 0.18
COMMD4-208ENST00000563220 ZNF182P17025 639 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-208ENST00000563220 TGFBR1P36897 503 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms