RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 GSX1Q9H4S2 264 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 EFCAB1Q9HAE3 211 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 CRLF2Q9HC73 371 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 GPR35Q9HC97 309 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 TAS2R5Q9NYW4 299 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 RIMS3Q9UJD0 308 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 AMDHD2Q9Y303 409 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 NOX1Q9Y5S8 564 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SNX13Q9Y5W8 968 aa10.18□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF503-AS2A6NEH8 195 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 TRIM64A6NGJ6 449 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 TRIM64BA6NI03 449 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 OR6C65A6NJZ3 312 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 RPL36A-HNRNPH2H7BZ11 118 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 OVOL3O00110 214 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 ARHGEF9O43307 516 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 MT-ATP6P00846 226 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 IFNA14P01570 189 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 ADORA3P0DMS8 318 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 IFNGR1P15260 489 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 NCK1P16333 377 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 AHCYP23526 432 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 CDKN1AP38936 164 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 YAP1P46937 504 aaKnown RBP10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 TAS2R41P59536 307 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 GNGT1P63211 74 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 SELENOWP63302 87 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.783e-9■□□□□ 10.4
RABGGTA-216ENST00000560243 CAMK2DQ13557 499 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 CEACAM16Q2WEN9 425 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 SHEQ5VZ18 495 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 HMBOX1Q6NT76 420 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 KLHL24Q6TFL4 600 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 HACD2Q6Y1H2 254 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC46A3Q7Z3Q1 461 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 ARPINQ7Z6K5 226 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 CPLX4Q7Z7G2 160 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 C20orf196Q8IYI0 205 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 GPR137CQ8N3F9 429 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 Q96MF0 132 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 HOPXQ9BPY8 73 aaPredicted RBP10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 SEC61A2Q9H9S3 476 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 FKRPQ9H9S5 495 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 C20orf141Q9NUB4 165 aa10.17□□□□□ -0.78
RABGGTA-216ENST00000560243 IGHV1-18A0A0C4DH31 117 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 ATP6V1G2-DDX39BF2Z307 99 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 J3KTA2 159 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 CXCR6O00574 342 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 PIP5K1CO60331 668 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 NDUFS7O75251 213 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 OR5F1O95221 314 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 ZNF682O95780 498 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 ASAH2BP0C7U1 165 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 PAX1P15863 534 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 FUT1P19526 365 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 BIDP55957 195 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 ATP5J2P56134 94 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 PSME3P61289 254 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 RPS4XP62701 263 aaKnown RBP10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 ANKRD16Q6P6B7 361 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 PXKQ7Z7A4 578 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 MYPOPQ86VE0 399 aaPredicted RBP10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 MEX3DQ86XN8 651 aaKnown RBP10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 RBM15BQ8NDT2 890 aaKnown RBP10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 PIK3C3Q8NEB9 887 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 TRAF4Q9BUZ4 470 aaPredicted RBP10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC19A3Q9BZV2 496 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 ALG2Q9H553 416 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 CXorf56Q9H5V9 222 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 NANSQ9NR45 359 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 POU2F3Q9UKI9 436 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 A4GNTQ9UNA3 340 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 MOKQ9UQ07 419 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 MGAT4BQ9UQ53 548 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 AP3M1Q9Y2T2 418 aa10.16□□□□□ -0.78
RABGGTA-216ENST00000560243 NAV3Q8IVL0 2385 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 ARPC4-TTLL3A0A0A6YYG9 625 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 H7C1Q1 480 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 FFAR1O14842 300 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 GSTA4O15217 222 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 AKAP8O43823 692 aaKnown RBP10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 OR6A2O95222 327 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 WNT11O96014 354 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 MT-ND1P03886 318 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 CELA3BP08861 270 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 UMPSP11172 480 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 SH3BGRP55822 239 aaPredicted RBP10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 UBE2NP61088 152 aaKnown RBP10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 ZP4Q12836 540 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 MELKQ14680 651 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 PRSS57Q6UWY2 283 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 SLC35D2Q76EJ3 337 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 TSEN54Q7Z6J9 526 aaKnown RBP10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 PIGWQ7Z7B1 504 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 DTX2Q86UW9 622 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 RNF148Q8N7C7 305 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
RABGGTA-216ENST00000560243 MAGEE2Q8TD90 523 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms