RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 OR10G2Q8NGC3 310 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 TSPAN32Q96QS1 320 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 OR2M2Q96R28 347 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 EGLN3Q9H6Z9 239 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 REEP1Q9H902 201 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 DNAJB9Q9UBS3 223 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 NOSIPQ9Y314 301 aaKnown RBP9.62□□□□□ -0.87
TPM1-217ENST00000559108 EMC9Q9Y3B6 208 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 ADAM18Q9Y3Q7 739 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 AP4S1Q9Y587 144 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 ADGRG4Q8IZF6 3080 aa9.62□□□□□ -0.87
TPM1-217ENST00000559108 HECTD1Q9ULT8 2610 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 IGKV1D-43A0A0B4J1Z2 117 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 UNC119BA6NIH7 251 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 PRSS44E7EML9 344 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 CCNB2O95067 398 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 VAMP5O95183 116 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 ITGA5P08648 1049 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 AHCYP23526 432 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 FPR3P25089 353 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 BIDP55957 195 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 CAMK2DQ13557 499 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 MFSD13AQ14CX5 517 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 ACKR1Q16570 336 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 CARD17Q5XLA6 110 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 NIPAL3Q6P499 406 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 SEZ6L2Q6UXD5 910 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 STAC2Q6ZMT1 411 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 SLC35D2Q76EJ3 337 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 AAED1Q7RTV5 226 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 CXorf67Q86X51 503 aaPredicted RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 UEVLDQ8IX04 471 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 ASB10Q8WXI3 467 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 HTRA1Q92743 480 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 HDAC2Q92769 488 aaKnown RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 NMD3Q96D46 503 aaKnown RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 ALKBH3Q96Q83 286 aaPredicted RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 FEVQ99581 238 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 RBM24Q9BX46 236 aaKnown RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 SEMA6AQ9H2E6 1030 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 NELFAQ9H3P2 528 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 PIGMQ9H3S5 423 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 KCNJ16Q9NPI9 418 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 EMC3Q9P0I2 261 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 REV1Q9UBZ9 1251 aa9.61□□□□□ -0.87
TPM1-217ENST00000559108 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 HRNRQ86YZ3 2850 aaPredicted RBP9.61□□□□□ -0.87
TPM1-217ENST00000559108 GPR171O14626 319 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 RNF13O43567 381 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 SOX14O95416 240 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 ADAP00813 363 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 IGHMP01871 453 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 THBDP07204 575 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 PGA4P0DJD7 388 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 PGA3P0DJD8 388 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 ZNF43P17038 809 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 COX5AP20674 150 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 DNAJA1P31689 397 aaKnown RBP9.6□□□□□ -0.87
TPM1-217ENST00000559108 IFNA8P32881 189 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 SLC9A3P48764 834 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 SMIM11AP58511 58 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 ERVK-25P63136 954 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 IL1RL1Q01638 556 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 TOP3AQ13472 1001 aaPredicted RBP9.6□□□□□ -0.87
TPM1-217ENST00000559108 ZBED5Q49AG3 693 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 ALG10Q5BKT4 473 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 C9orf135Q5VTT2 229 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 GTF2IRD2BQ6EKJ0 949 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 FAM122BQ7Z309 247 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 OAFQ86UD1 273 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 GTF2IRD2Q86UP8 949 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 ZNF519Q8TB69 540 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 RNASE6Q93091 150 aaKnown RBP9.6□□□□□ -0.87
TPM1-217ENST00000559108 APH1AQ96BI3 265 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 SAMD8Q96LT4 415 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 Q96M85 177 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 KATNB1Q9BVA0 655 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 OR52D1Q9H346 318 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 S100A14Q9HCY8 104 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 INIPQ9NRY2 104 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 PDP1Q9P0J1 537 aaPredicted RBP9.6□□□□□ -0.87
TPM1-217ENST00000559108 MALT1Q9UDY8 824 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 PLEKHB1Q9UF11 243 aaPredicted RBP9.6□□□□□ -0.87
TPM1-217ENST00000559108 TMCC3Q9ULS5 477 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 RCE1Q9Y256 329 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 TMEM5Q9Y2B1 443 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 NOX1Q9Y5S8 564 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
TPM1-217ENST00000559108 NBPF19A0A087WUL8 3843 aa9.6□□□□□ -0.87
TPM1-217ENST00000559108 H7C1C5 153 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 SIAH2O43255 324 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 MITFO75030 526 aaPredicted RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 MRPL33O75394 65 aaKnown RBP9.59□□□□□ -0.87
TPM1-217ENST00000559108 LYZL6O75951 148 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 SEC14L2O76054 403 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 PPP1R3DO95685 299 aa9.59□□□□□ -0.87
TPM1-217ENST00000559108 UGT2B10P36537 528 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms