RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 STAMBPO95630 424 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 F13BP05160 661 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 MAKP20794 623 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 MPGP29372 298 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 HOXC12P31275 282 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 AQP2P41181 271 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 MS4A2Q01362 244 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 ROR2Q01974 943 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 TGFBR3Q03167 851 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 GABRA6Q16445 453 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 HMBOX1Q6NT76 420 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 MBOAT2Q6ZWT7 520 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 SLC35D2Q76EJ3 337 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 ZDHHC21Q8IVQ6 265 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 WDFY1Q8IWB7 410 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 TMEM123Q8N131 208 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 PIK3C3Q8NEB9 887 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 MOSPD2Q8NHP6 518 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 SLC7A13Q8TCU3 470 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 PLPPR2Q96GM1 343 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 LRGUKQ96M69 825 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 HS3ST6Q96QI5 342 aa13.94□□□□□ -0.18
RABGGTA-206ENST00000558649 TRAV27A0A087WT01 109 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 TRBV4-1A0A0J9YWV2 114 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 EFCAB9A8MZ26 197 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 MCIDASD6RGH6 385 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 KLF4O43474 513 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 GOSR1O95249 250 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 IGF2P01344 180 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 PRKCDQ05655 676 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 ZP4Q12836 540 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 HIKESHIQ53FT3 197 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 BEX5Q5H9J7 111 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 MTX3Q5HYI7 312 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 TIMM23BQ5SRD1 257 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 PHYHD1Q5SRE7 291 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 OR7E24Q6IFN5 339 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 LCN8Q6JVE9 175 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 PODNL1Q6PEZ8 512 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 CDH24Q86UP0 819 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 CDK20Q8IZL9 346 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 OR13C2Q8NGS9 318 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 OR6N1Q8NGY5 312 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 SLC7A6OSQ96CW6 309 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 ASB9Q96DX5 294 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 FAM46AQ96IP4 442 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 BTBD10Q9BSF8 475 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 LINC00470Q9BZP3 86 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 LIME1Q9H400 295 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 ANKRD19PQ9H560 264 aa13.93□□□□□ -0.18
RABGGTA-206ENST00000558649 A0A096LPE4 126 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 A0A1W2PPR1 153 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 A0A1W2PPZ6 126 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 A0A1W2PRG6 482 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 A0A1W2PRQ8 180 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 TCRBV5S2A0A599 114 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 SEC14L2O76054 403 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 GADD45GO95257 159 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 BNIP1Q12981 228 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 TOP3AQ13472 1001 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 DGCR6Q14129 220 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 LAPTM4AQ15012 233 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 KLHL24Q6TFL4 600 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 OAFQ86UD1 273 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 IGFN1Q86VF2 1251 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 RNF113BQ8IZP6 322 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 OR51A7Q8NH64 312 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 USB1Q9BQ65 265 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 C1QTNF6Q9BXI9 259 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 UBTD1Q9HAC8 227 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 CRLF2Q9HC73 371 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 GPR35Q9HC97 309 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 NGBQ9NPG2 151 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 IL1RAPQ9NPH3 570 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 B3GAT2Q9NPZ5 323 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 INIPQ9NRY2 104 aa13.92□□□□□ -0.18
RABGGTA-206ENST00000558649 APCP25054 2843 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 CLOCKO15516 846 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 DNAJC8O75937 253 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 BCL10O95999 233 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 RRM2P31350 389 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 CSNK1A1P48729 337 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ZNF83P51522 516 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 SEC23BQ15437 767 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 CEACAM16Q2WEN9 425 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 IQCCQ4KMZ1 466 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ALG10Q5BKT4 473 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 NHLRC1Q6VVB1 395 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 P2RY8Q86VZ1 359 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 C20orf196Q8IYI0 205 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 OR4K5Q8NGD3 323 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 OR1K1Q8NGR3 316 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 LIPHQ8WWY8 451 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ZNF837Q96EG3 531 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ADAD1Q96M93 576 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 MUS81Q96NY9 551 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ULBP2Q9BZM5 246 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 TRIM15Q9C019 465 aa13.91□□□□□ -0.18
RABGGTA-206ENST00000558649 ESRP2Q9H6T0 727 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms