RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
SPG11-210ENST00000558319 ALDOCP09972 364 aaKnown RBP12.95□□□□□ -0.34
SPG11-210ENST00000558319 TOR2AQ5JU69 321 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 TRILQ7L0X0 811 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 UMODL1-AS1Q8N2C9 162 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ERVMER34-1Q9H9K5 563 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 EMCNQ9ULC0 261 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 D6RAR5 112 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 APBB3O95704 486 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 HBE1P02100 147 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 HRH2P25021 359 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 HOXA9P31269 272 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 THBS3P49746 956 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ZNF252P-AS1Q0IIN9 211 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 VEZF1Q14119 521 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 TCEAL1Q15170 157 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 PHLDA2Q53GA4 152 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ZNF468Q5VIY5 522 aaPredicted RBP12.95□□□□□ -0.34
SPG11-210ENST00000558319 SCD5Q86SK9 330 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SLC35F3Q8IY50 421 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 PSMF1Q92530 271 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SLC41A2Q96JW4 573 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SLC12A9Q9BXP2 914 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 EMC7Q9NPA0 242 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 TRAV20A0A0B4J274 112 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 A6NIZ1 184 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 IL2RGP31785 369 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 RAP1BP61224 184 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 RAP1AP62834 184 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 KCTD11Q693B1 232 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 TMEM71Q6P5X7 295 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 EGLN2Q96KS0 407 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 NOX4Q9NPH5 578 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 TRAPPC2LQ9UL33 140 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.94□□□□□ -0.34
SPG11-210ENST00000558319 SPEF2Q9C093 1822 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 MBP02144 154 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 TK1P04183 234 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 NME1P15531 152 aaKnown RBP12.94□□□□□ -0.34
SPG11-210ENST00000558319 TNFRSF17Q02223 184 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 IKZF1Q13422 519 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 C10orf90Q96M02 699 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 CDHR4A6H8M9 788 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 TRAPPC2LH3BP13 241 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 HAGHQ16775 308 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 OVCH1Q7RTY7 1134 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SLIT3O75094 1523 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 ABCC6O95255 1503 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 FAM166BA8MTA8 275 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SUSD5O60279 629 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 KCNK5O95279 499 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 GPR85P60893 370 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 ARHGAP11BQ3KRB8 267 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 FAM78AQ5JUQ0 283 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SLC51BQ86UW2 128 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 C1orf87Q8N0U7 546 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 C15orf54Q8N8G6 183 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 GHSRQ92847 366 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 RAB3CQ96E17 227 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 CBLCQ9ULV8 474 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
SPG11-210ENST00000558319 FGF4P08620 206 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 PCSK6P29122 969 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 RGRP47804 291 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 CBLL1Q75N03 491 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 NRSN2Q9GZP1 204 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 HOXD1Q9GZZ0 328 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 TNFRSF19Q9NS68 423 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SDK1Q7Z5N4 2213 aa12.94□□□□□ -0.34
SPG11-210ENST00000558319 SLC43A1O75387 559 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 MRPL33O75394 65 aaKnown RBP12.93□□□□□ -0.34
SPG11-210ENST00000558319 DFFBO76075 338 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 SLC36A2Q495M3 483 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 UPRTQ96BW1 309 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 DDOQ99489 341 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 SELENOIQ9C0D9 397 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 C20orf27Q9GZN8 174 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 MYOTQ9UBF9 498 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 TMEM72A0PK05 275 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
SPG11-210ENST00000558319 CTRB1P17538 263 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 CCR7P32248 378 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 RFC3P40938 356 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 SLC14A2Q15849 920 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 CTRB2Q6GPI1 263 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 STEAP1BQ6NZ63 245 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 PRICKLE2Q7Z3G6 844 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 PPP1R3BQ86XI6 285 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 OR2T11Q8NH01 316 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 VN1R3Q9BXE9 311 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 SPACA1Q9HBV2 294 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 ZNF337Q9Y3M9 751 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 TGOLN2O43493 480 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 B4GALT3O60512 393 aa12.93□□□□□ -0.34
SPG11-210ENST00000558319 UGDHO60701 494 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms