RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 MEIKINA0A087WXM9 373 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 MEIS3P1A6NDR6 274 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 EFCAB7A8K855 629 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 DOK2O60496 412 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 PLGP00747 810 aaPredicted RBP11.72□□□□□ -0.53
LDLR-207ENST00000558013 RAF1P04049 648 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 HPGDP15428 266 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 ADH7P40394 386 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 OR1D4P47884 311 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 YOD1Q5VVQ6 348 aaPredicted RBP11.72□□□□□ -0.53
LDLR-207ENST00000558013 JAZF1Q86VZ6 243 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 GLB1L2Q8IW92 636 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 PRSS58Q8IYP2 241 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 OR52B4Q8NGK2 314 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 OR56B4Q8NH76 319 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 G6PC3Q9BUM1 346 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 LRRC61Q9BV99 259 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 OR8D2Q9GZM6 311 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 SYT4Q9H2B2 425 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 RANBP3Q9H6Z4 567 aaPredicted RBP11.72□□□□□ -0.53
LDLR-207ENST00000558013 COQ3Q9NZJ6 369 aa11.72□□□□□ -0.53
LDLR-207ENST00000558013 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 C17orf105B2RV13 164 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 KHNYNO15037 678 aaKnown RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 ICMTO60725 284 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 PEX14O75381 377 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 KHDRBS3O75525 346 aaKnown RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 GRK6P43250 576 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 P2RX1P51575 399 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 OC90Q02509 493 aaPredicted RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 RPL18Q07020 188 aaKnown RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 C19orf57Q0VDD7 668 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 LINC00303Q3SY05 128 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 MESTQ5EB52 335 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 TMEM69Q5SWH9 247 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 SLC35D2Q76EJ3 337 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 LUZP2Q86TE4 346 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 TMPRSS12Q86WS5 348 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 OR6N2Q8NGY6 317 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 TRAF4Q9BUZ4 470 aaPredicted RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 MMP25Q9NPA2 562 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 PPIEQ9UNP9 301 aaKnown RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 FOXJ3Q9UPW0 622 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 FREM2Q5SZK8 3169 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 IGHV5-51A0A0C4DH38 117 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 C11orf98E9PRG8 122 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 GSTZ1O43708 216 aaPredicted RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 ZNF250P15622 560 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 RABIFP47224 123 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 EFNB2P52799 333 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 UBE2MP61081 183 aaKnown RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 FUT7Q11130 342 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 ATG4DQ86TL0 474 aaPredicted RBP11.71□□□□□ -0.53
LDLR-207ENST00000558013 TMEM151BQ8IW70 566 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 FAM174AQ8TBP5 190 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 THEM6Q8WUY1 208 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 C17orf50Q8WW18 174 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 TSLPQ969D9 159 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 TAAR8Q969N4 342 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 GAL3ST1Q99999 423 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 SLC6A5Q9Y345 797 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 LRP4O75096 1905 aa11.71□□□□□ -0.53
LDLR-207ENST00000558013 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 PRAMEF26H0Y7S4 382 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 CLDN4O14493 209 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 TPOP07202 933 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 EFNA3P52797 238 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.54
LDLR-207ENST00000558013 GAS6Q14393 721 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 SLC22A10Q63ZE4 541 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 SLC35F3Q8IY50 421 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 EXD3Q8N9H8 876 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 LRRC75AQ8NAA5 344 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 OR4D10Q8NGI6 311 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 OR5AK2Q8NH90 309 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 TGM7Q96PF1 710 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 GAL3ST4Q96RP7 486 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 ZNF436Q9C0F3 470 aaPredicted RBP11.71□□□□□ -0.54
LDLR-207ENST00000558013 FBRSQ9HAH7 460 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 FKBP7Q9Y680 259 aa11.71□□□□□ -0.54
LDLR-207ENST00000558013 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 CD14P08571 375 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 TACR3P29371 465 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 BLVRAP53004 296 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 SKP2Q13309 424 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 TOR2AQ5JU69 321 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 PM20D2Q8IYS1 436 aa11.7□□□□□ -0.54
LDLR-207ENST00000558013 FTMTQ8N4E7 242 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms