RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DNAJA3Q96EY1 480 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 C14orf79Q96F83 325 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF385AQ96PM9 386 aaKnown RBP12.11□□□□□ -0.47
SHMT2-234ENST00000557703 C12orf49Q9H741 205 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 B3GAT2Q9NPZ5 323 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 C20orf141Q9NUB4 165 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF226Q9NYT6 803 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 AURKCQ9UQB9 309 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 TESMINQ9Y4I5 508 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 LYVE1Q9Y5Y7 322 aa12.11□□□□□ -0.47
SHMT2-234ENST00000557703 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 TNFRSF11BO00300 401 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 AHCYL1O43865 530 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 DEAF1O75398 565 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 KRT33AO76009 404 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 BCL10O95999 233 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 CST1P01037 141 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 EPXP11678 715 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 FCGR1AP12314 374 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 FPR3P25089 353 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 OMPP47874 163 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 CLDN17P56750 224 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 RPL18Q07020 188 aaKnown RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 COX10Q12887 443 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 DAZAP2Q15038 168 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 MEX3BQ6ZN04 569 aaKnown RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 CCDC36Q8IYA8 594 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 UBE2J2Q8N2K1 259 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 HSD17B8Q92506 261 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 NRBF2Q96F24 287 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 SLC25A44Q96H78 314 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 RSRC1Q96IZ7 334 aaKnown RBP12.1□□□□□ -0.47
SHMT2-234ENST00000557703 TXNIPQ9H3M7 391 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 OBP2BQ9NPH6 170 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
SHMT2-234ENST00000557703 ABCA4P78363 2273 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
SHMT2-234ENST00000557703 TRBV4-1A0A0J9YWV2 114 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 LRRN3E7EW58 273 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 PDLIM1O00151 329 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 GNGT2O14610 69 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 CASKO14936 926 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 OR10H3O60404 316 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 ADAP00813 363 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 IGHMP01871 453 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 APEHP13798 732 aaKnown RBP12.09□□□□□ -0.47
SHMT2-234ENST00000557703 MAKP20794 623 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 GSTM3P21266 225 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 CBLP22681 906 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 IL32P24001 234 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 SSTR2P30874 369 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 NTF4P34130 210 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 FAM27E3Q08E93 113 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 MICAQ29983 383 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 ALG10Q5BKT4 473 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 TIMM23BQ5SRD1 257 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 GPR139Q6DWJ6 353 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 ZFP1Q6P2D0 407 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 NIPAL3Q6P499 406 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 TBPL2Q6SJ96 375 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 GPR137CQ8N3F9 429 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 LRRC17Q8N6Y2 441 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 OR52J3Q8NH60 311 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 DNAJC9Q8WXX5 260 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-234ENST00000557703 MUS81Q96NY9 551 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 OR2M2Q96R28 347 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-234ENST00000557703 MGAT4BQ9UQ53 548 aa12.09□□□□□ -0.47
SHMT2-234ENST00000557703 SAMHD1Q9Y3Z3 626 aaKnown RBP12.09□□□□□ -0.47
SHMT2-234ENST00000557703 SH3D21A4FU49 640 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 SLC35F4A4IF30 521 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 A6NIZ1 184 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 C19orf84I3L1E1 186 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 CLOCKO15516 846 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 KLF4O43474 513 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 IDH3BO43837 385 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 FKBP6O75344 327 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 PTP4A3O75365 173 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 DIRAS1O95057 198 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 CCNB2O95067 398 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 NDUFB2O95178 105 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 HPRP00739 348 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 IGHG1P01857 330 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 IFNGR1P15260 489 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 GRNP28799 593 aaKnown RBP12.08□□□□□ -0.48
SHMT2-234ENST00000557703 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
SHMT2-234ENST00000557703 ACTR3P61158 418 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 RAP1BP61224 184 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 RAP1AP62834 184 aa12.08□□□□□ -0.48
SHMT2-234ENST00000557703 SEC23BQ15437 767 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms