RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CBX7O95931 251 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 MELTFP08582 738 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 RPA2P15927 270 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 UBXN2BQ14CS0 331 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 TOMM20Q15388 145 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 TUSC1Q2TAM9 212 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 KIRREL2Q6UWL6 708 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 ZAR1Q86SH2 424 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 LRRTM1Q86UE6 522 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 BVESQ8NE79 360 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 OR52R1Q8NGF1 315 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 GCDHQ92947 438 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-232ENST00000557487 CDCA3Q99618 268 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-232ENST00000557487 ALG12Q9BV10 488 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 TRPV4Q9HBA0 871 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 FGF22Q9HCT0 170 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 SLC17A5Q9NRA2 495 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 STEAP1Q9UHE8 339 aa14.87□□□□□ -0.03
SHMT2-232ENST00000557487 NPIPB9F8W1W9 429 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 PYCARD-AS1I3L0S3 204 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 CT62P0C5K7 136 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 RAB38P57729 211 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 SNRPNP63162 240 aaKnown RBP14.86□□□□□ -0.03
SHMT2-232ENST00000557487 LTBQ06643 244 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ANKRD16Q6P6B7 361 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 CA13Q8N1Q1 262 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ESX1Q8N693 406 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 OR2AK2Q8NG84 335 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 OR6K3Q8NGY3 331 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 LIPHQ8WWY8 451 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 OIT3Q8WWZ8 545 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 RNF166Q96A37 237 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-232ENST00000557487 GINS4Q9BRT9 223 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ADAM18Q9Y3Q7 739 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 TRBV5-7A0A0A0MS05 114 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ANXA2P2A6NMY6 339 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 H0YGG7 62 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 DNAJB6O75190 326 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ZNF254O75437 659 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 APODP05090 189 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ANXA2P07355 339 aaKnown RBP14.86□□□□□ -0.03
SHMT2-232ENST00000557487 GJA4P35212 333 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 CD96P40200 585 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ARF3P61204 181 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-232ENST00000557487 PSG6Q00889 435 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 HYAL1Q12794 435 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 RUNX3Q13761 415 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ZNF273Q14593 569 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 C2orf27AQ580R0 203 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 EMC4Q5J8M3 183 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 JAZF1Q86VZ6 243 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 CACUL1Q86Y37 369 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 CDH26Q8IXH8 852 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 OR5M9Q8NGP3 310 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 CCDC74AQ96AQ1 378 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ANKRD9Q96BM1 317 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ORAI1Q96D31 301 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 COMMD4Q9H0A8 199 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 ARL6Q9H0F7 186 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 DNTTIP1Q9H147 329 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 SLC25A32Q9H2D1 315 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 COQ3Q9NZJ6 369 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 UPB1Q9UBR1 384 aa14.86□□□□□ -0.03
SHMT2-232ENST00000557487 TMEM212A6NML5 194 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 TTLL8A6PVC2 850 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 TOR1AO14656 332 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 PHYHO14832 338 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 ARPC5O15511 151 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 ADAM11O75078 769 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 UPK3AO75631 287 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 AKAIN1P0CW23 69 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 VSIG10L2P0DP72 767 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 ITPKBP27987 946 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 CLDN12P56749 244 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 MAT1AQ00266 395 aaKnown RBP14.85□□□□□ -0.03
SHMT2-232ENST00000557487 EGR3Q06889 387 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 BTN1A1Q13410 526 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 PCGF3Q3KNV8 242 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 PRRT3Q5FWE3 981 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 RNF44Q7L0R7 432 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 TMPRSS12Q86WS5 348 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 COQ8AQ8NI60 647 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 CCDC107Q8WV48 283 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 ZNRF4Q8WWF5 429 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 EDAQ92838 391 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 TOE1Q96GM8 510 aaKnown RBP14.85□□□□□ -0.03
SHMT2-232ENST00000557487 ATG2AQ2TAZ0 1938 aa14.85□□□□□ -0.03
SHMT2-232ENST00000557487 FAM221BA6H8Z2 402 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 ZNF860A6NHJ4 632 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 NARSO43776 548 aaKnown RBP14.84□□□□□ -0.03
SHMT2-232ENST00000557487 OR10H2O60403 315 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 ABHD16AO95870 558 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 TXNDC12O95881 172 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 PNMTP11086 282 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 AGTR1P30556 359 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 CSF2RBP32927 897 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 GRK6P43250 576 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 RASGEF1BQ0VAM2 473 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 TCEA2Q15560 299 aa14.84□□□□□ -0.03
SHMT2-232ENST00000557487 LEG1Q6P5S2 330 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms