RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PPIAL4EA0A075B759 164 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 PPIAL4CA0A0B4J2A2 164 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 LOC102725191A0A1B0GVB3 256 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 CDHR4A6H8M9 788 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 PPIAL4DF5H284 164 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 NPHS1O60500 1241 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 FAM153BP0C7A2 387 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 PPIAL4FP0DN26 164 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 IL7RP16871 459 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 ZNF43P17038 809 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 ALDH3A1P30838 453 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 GIPRP48546 466 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 RAB1AP62820 205 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 LCN2P80188 198 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 BAMBIQ13145 260 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 RAB39AQ14964 217 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 SLC9A3R2Q15599 337 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 CHI3L2Q15782 390 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 WBP2NLQ6ICG8 309 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 RBMS3Q6XE24 437 aaKnown RBP10.65□□□□□ -0.7
PSEN1-221ENST00000557293 RHOUQ7L0Q8 258 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 VRK2Q86Y07 508 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 C20orf196Q8IYI0 205 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 CLIP4Q8N3C7 705 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 C17orf53Q8N3J3 647 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-221ENST00000557293 CADM2Q8N3J6 435 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 CCDC63Q8NA47 563 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 AGR3Q8TD06 166 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 KTI12Q96EK9 354 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-221ENST00000557293 ZMAT3Q9HA38 289 aaKnown RBP10.65□□□□□ -0.7
PSEN1-221ENST00000557293 HINT3Q9NQE9 182 aaKnown RBP10.65□□□□□ -0.7
PSEN1-221ENST00000557293 ASIC5Q9NY37 505 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 PLEK2Q9NYT0 353 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 MARCOQ9UEW3 520 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-221ENST00000557293 NUP50Q9UKX7 468 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 MMP24Q9Y5R2 645 aa10.65□□□□□ -0.7
PSEN1-221ENST00000557293 IGHV1-69-2A0A0G2JMI3 117 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 MS4A18H0YCH9 400 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 TRAPPC2LH3BP13 241 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 CLDN34H7C241 214 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 M0R3G1 203 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 HPRP00739 348 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 DBIP07108 87 aaKnown RBP10.64□□□□□ -0.71
PSEN1-221ENST00000557293 PATE4P0C8F1 98 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 HLA-DOBP13765 273 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 ZNF250P15622 560 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 OMGP23515 440 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 RPS5P46782 204 aaKnown RBP10.64□□□□□ -0.71
PSEN1-221ENST00000557293 ERVS71-1P61550 626 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 RPS23P62266 143 aaKnown RBP10.64□□□□□ -0.71
PSEN1-221ENST00000557293 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 MS4A18Q3C1V0 323 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 MMEL1Q495T6 779 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 GLIPR1L2Q4G1C9 344 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 COX20Q5RI15 118 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 GKAP1Q5VSY0 366 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-221ENST00000557293 ZNF813Q6ZN06 617 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 ZNF836Q6ZNA1 936 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 RNF130Q86XS8 419 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 ZNF440Q8IYI8 595 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 PAQR4Q8N4S7 273 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-221ENST00000557293 PIK3C3Q8NEB9 887 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 POP5Q969H6 163 aaKnown RBP10.64□□□□□ -0.71
PSEN1-221ENST00000557293 TAAR8Q969N4 342 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 TXNDC15Q96J42 360 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 GPA33Q99795 319 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 PKP2Q99959 881 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 SLC35A5Q9BS91 424 aa10.64□□□□□ -0.71
PSEN1-221ENST00000557293 NBEAL2Q6ZNJ1 2754 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 A0A1W2PPW3 197 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 COPEO14579 308 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 AHSA1O95433 338 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 SERPINA5P05154 406 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 PTDSS1P48651 473 aaKnown RBP10.63□□□□□ -0.71
PSEN1-221ENST00000557293 KRTAP10-3P60369 221 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 HNRNPA0Q13151 305 aaKnown RBP10.63□□□□□ -0.71
PSEN1-221ENST00000557293 NKPD1Q17RQ9 610 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 PCGF3Q3KNV8 242 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 USP51Q70EK9 711 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 RETREG3Q86VR2 466 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 SKA3Q8IX90 412 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 GSPT2Q8IYD1 628 aaKnown RBP10.63□□□□□ -0.71
PSEN1-221ENST00000557293 CNPY4Q8N129 248 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 TMIGD2Q96BF3 282 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 TUBGCP3Q96CW5 907 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 LRR1Q96L50 414 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 MECRQ9BV79 373 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 EMC6Q9BV81 110 aa10.63□□□□□ -0.71
PSEN1-221ENST00000557293 RSPO3Q9BXY4 272 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-221ENST00000557293 DENND2DQ9H6A0 471 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-221ENST00000557293 POLR3KQ9Y2Y1 108 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-221ENST00000557293 A0A096LPI6 279 aa10.62□□□□□ -0.71
PSEN1-221ENST00000557293 M0R082 166 aa10.62□□□□□ -0.71
PSEN1-221ENST00000557293 SHBGP04278 402 aa10.62□□□□□ -0.71
PSEN1-221ENST00000557293 UQCRBP14927 111 aa10.62□□□□□ -0.71
PSEN1-221ENST00000557293 B4GALT1P15291 398 aa10.62□□□□□ -0.71
PSEN1-221ENST00000557293 MAKP20794 623 aa10.62□□□□□ -0.71
PSEN1-221ENST00000557293 RBMXP38159 391 aaKnown RBP10.62□□□□□ -0.71
PSEN1-221ENST00000557293 RAD52P43351 418 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms