RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CCDC36Q8IYA8 594 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 MUC15Q8N387 334 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SMYD1Q8NB12 490 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 PCYOX1LQ8NBM8 494 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 PIK3C3Q8NEB9 887 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 KBTBD8Q8NFY9 601 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 KTI12Q96EK9 354 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 DHRS9Q9BPW9 319 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SLC52A3Q9NQ40 469 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SLC17A5Q9NRA2 495 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 GID8Q9NWU2 228 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 RCE1Q9Y256 329 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 CHST2Q9Y4C5 530 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 PMF1-BGLAPU3KQ54 211 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ARID1AO14497 2285 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 MED13LQ71F56 2210 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 A0A087WUJ7 227 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 TRBV5-3A0A0A0MS03 114 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF726A6NNF4 738 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 PDLIM1O00151 329 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 FMO6PO60774 539 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 MFN2O95140 757 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 HIST1H2ABP04908 130 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 HOXB9P17482 250 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-222ENST00000556768 AHCYP23526 432 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 IFNA8P32881 189 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 TTKP33981 857 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 SELENOPP49908 381 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 MECP2P51608 486 aaKnown RBP6.42□□□□□ -1.38
SCFD1-222ENST00000556768 CLDN17P56750 224 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 MTPNP58546 118 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 EGR4Q05215 589 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 LTBQ06643 244 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 PMS2P3Q13401 168 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ADRM1Q16186 407 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF544Q6NX49 715 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ANKRD16Q6P6B7 361 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF613Q6PF04 617 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 HIST3H2AQ7L7L0 130 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 KDM8Q8N371 416 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ZIC4Q8N9L1 334 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 OR10A6Q8NH74 314 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 LILRB1Q8NHL6 650 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-222ENST00000556768 PROX1Q92786 737 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 HIST1H2ACQ93077 130 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 TAAR8Q969N4 342 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 COX4I2Q96KJ9 171 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 MCHR1Q99705 422 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 TMEM120AQ9BXJ8 343 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 KAT8Q9H7Z6 458 aaKnown RBP6.42□□□□□ -1.38
SCFD1-222ENST00000556768 B3GAT2Q9NPZ5 323 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 ATP23Q9Y6H3 246 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 PCNX3Q9H6A9 2034 aa6.42□□□□□ -1.38
SCFD1-222ENST00000556768 LOC102725191A0A1B0GVB3 256 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TRIM64A6NGJ6 449 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TRIM64BA6NI03 449 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 BBIP1A8MTZ0 92 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 SHISA9B4DS77 424 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 FTCDNL1E5RQL4 147 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 OVOL3O00110 214 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TPST1O60507 370 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ENTPD5O75356 428 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 LGI1O95970 557 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 MT-ATP6P00846 226 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 HEXAP06865 529 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 GRPRP30550 384 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 APOBEC3AP31941 199 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CDKN1AP38936 164 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CDH12P55289 794 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 DSCR9P59020 149 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 DUSP7Q16829 419 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 PGGHGQ32M88 737 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TRMT5Q32P41 509 aaKnown RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 HIKESHIQ53FT3 197 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 COQ5Q5HYK3 327 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TTC33Q6PID6 262 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 Q71RC1 249 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 KRTAP1-3Q8IUG1 177 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 SCAIQ8N9R8 606 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CLRN3Q8NCR9 226 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 OR6S1Q8NH40 331 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 EDARADDQ8WWZ3 215 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NEUROG1Q92886 237 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ALKBH3Q96Q83 286 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 SMR3AQ99954 134 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CPPED1Q9BRF8 314 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 RHNO1Q9BSD3 238 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 LINC00470Q9BZP3 86 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 AMBRA1Q9C0C7 1298 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 IKZF5Q9H5V7 419 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CRLF2Q9HC73 371 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NPAP1Q9NZP6 1156 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 TAGLN3Q9UI15 199 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 FBXO9Q9UK97 447 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-222ENST00000556768 BAG5Q9UL15 447 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 ZANQ9Y493 2812 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 NOX1Q9Y5S8 564 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 A0A0B4J2E0 115 aa6.41□□□□□ -1.38
SCFD1-222ENST00000556768 LOC100653049A0A140TA62 436 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms