RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CDHR4A6H8M9 788 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 CFAP73A6NFT4 308 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 LIPT2A6NK58 231 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 AQP7P3A6NL99 342 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 ATP6V1G2-DDX39BF2Z307 99 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 AP3D1O14617 1153 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 TM9SF1O15321 606 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 FZD7O75084 574 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 PDE5AO76074 875 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 CHRM4P08173 479 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 UQCRBP14927 111 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 ZNF23P17027 643 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 LBPP18428 481 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 TACR3P29371 465 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 RPL14P50914 215 aaKnown RBP8.69□□□□□ -1.02
SCFD1-220ENST00000556486 ANXA11P50995 505 aaKnown RBP8.69□□□□□ -1.02
SCFD1-220ENST00000556486 OR2B6P58173 313 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 PRPS1P60891 318 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 ABCE1P61221 599 aaKnown RBP8.69□□□□□ -1.02
SCFD1-220ENST00000556486 IFFO1Q0D2I5 559 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 DBPQ10586 325 aaPredicted RBP8.69□□□□□ -1.02
SCFD1-220ENST00000556486 EPS8Q12929 822 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 CCNIQ14094 377 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 GNA13Q14344 377 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 MST1LQ2TV78 715 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 ZNF440Q8IYI8 595 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 TRIML2Q8N7C3 387 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 SNX18Q96RF0 628 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 SORT1Q99523 831 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 MEAF6Q9HAF1 191 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 MOV10Q9HCE1 1003 aaKnown RBP8.69□□□□□ -1.02
SCFD1-220ENST00000556486 CORO2BQ9UQ03 480 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 PMF1-BGLAPU3KQ54 211 aa8.69□□□□□ -1.02
SCFD1-220ENST00000556486 TMEM72A0PK05 275 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 ZC3H12DA2A288 527 aaKnown RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 OR6C65A6NJZ3 312 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 NPIPB7O75200 414 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 VAMP5O95183 116 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 WNT11O96014 354 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 GPIP06744 558 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 DBIP07108 87 aaKnown RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 H2AFB2P0C5Z0 115 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 APEX1P27695 318 aaKnown RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 S100A3P33764 101 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 CHI3L1P36222 383 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 P2RY4P51582 365 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 VSNL1P62760 191 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 MAPK11Q15759 364 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 CHI3L2Q15782 390 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 SYPL1Q16563 259 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 ZSWIM7Q19AV6 140 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 GPAT3Q53EU6 434 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 TNFAIP8L3Q5GJ75 292 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 MRPL2Q5T653 305 aaKnown RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 ABHD12BQ7Z5M8 362 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 RNF130Q86XS8 419 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 MREGQ8N565 214 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 ANKFN1Q8N957 763 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 OR9K2Q8NGE7 335 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 MAGEE2Q8TD90 523 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 WDR60Q8WVS4 1066 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 ZMYND19Q96E35 227 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 TEX37Q96LM6 180 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 ADI1Q9BV57 179 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 KATNB1Q9BVA0 655 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 MYOZ1Q9NP98 299 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 CRNNQ9UBG3 495 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-220ENST00000556486 UPB1Q9UBR1 384 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 SCOCQ9UIL1 159 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 FKBP7Q9Y680 259 aa8.68□□□□□ -1.02
SCFD1-220ENST00000556486 TRRAPQ9Y4A5 3859 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 A0A096LPI6 279 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 ARPC4-TTLL3A0A0A6YYG9 625 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 CPSF4O95639 269 aaKnown RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 MPIG6BO95866 241 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 IGLV1-44P01699 117 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 IGLV1-40P01703 118 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 C1QCP02747 245 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 ALDOCP09972 364 aaKnown RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 IL7RP16871 459 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 FUT4P22083 530 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 ACAA2P42765 397 aaKnown RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 SLC1A6P48664 564 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 MVDP53602 400 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 RAB1AP62820 205 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 TRIP10Q15642 601 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 EFNB3Q15768 340 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 FAM209BQ5JX69 171 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 OTUD3Q5T2D3 398 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 WDR93Q6P2C0 686 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 SLC46A3Q7Z3Q1 461 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 SPATA19Q7Z5L4 167 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 ZCCHC24Q8N2G6 241 aaKnown RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 GLB1L3Q8NCI6 653 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 SLC35B4Q969S0 331 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 PKNOX2Q96KN3 472 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 ZNF385AQ96PM9 386 aaKnown RBP8.67□□□□□ -1.02
SCFD1-220ENST00000556486 PANX1Q96RD7 426 aa8.67□□□□□ -1.02
SCFD1-220ENST00000556486 NUF2Q9BZD4 464 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms