RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CDC42EP2O14613 210 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 EEF1E1O43324 174 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 KLF4O43474 513 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 TRAF3IP2O43734 574 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 RAMP1O60894 148 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 PTP4A3O75365 173 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 SLC43A1O75387 559 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 TNFSF13O75888 250 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CLDN14O95500 239 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 HPRP00739 348 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 GASTP01350 101 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 F13BP05160 661 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CD14P08571 375 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 TSPAN19P0C672 248 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 APEHP13798 732 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 POU2F1P14859 743 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 IFNGR1P15260 489 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CDH2P19022 906 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 KLK2P20151 261 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 OR3A2P47893 321 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 ASCL1P50553 236 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RPS6KA3P51812 740 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CTXN1P60606 82 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RAP1BP61224 184 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RAP1AP62834 184 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 ELF3P78545 371 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RCN1Q15293 331 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 GUSBP1Q15486 140 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RFX4Q33E94 735 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 ZNF770Q6IQ21 691 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 NIPAL3Q6P499 406 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 SMARCD3Q6STE5 483 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 DPY19L2P2Q6ZN68 376 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RASSF6Q6ZTQ3 369 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 BEND4Q6ZU67 534 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 NCCRP1Q6ZVX7 275 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 SLC35D2Q76EJ3 337 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 BTLAQ7Z6A9 289 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 MEX3DQ86XN8 651 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 EPHX4Q8IUS5 362 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 UBE2J2Q8N2K1 259 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 GPR137CQ8N3F9 429 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CLDN22Q8N7P3 220 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 NAXEQ8NCW5 288 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 OR6X1Q8NH79 312 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 MOSPD2Q8NHP6 518 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 TEX47Q8TBZ9 253 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 FANK1Q8TC84 345 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 FNDC8Q8TC99 324 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 SSC4DQ8WTU2 575 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 ITLN2Q8WWU7 325 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 GTPBP3Q969Y2 492 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 ZNF775Q96BV0 537 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 STARD4Q96DR4 205 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 PKP2Q99959 881 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RBM4BQ9BQ04 359 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 C9orf16Q9BUW7 83 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 RBM4Q9BWF3 364 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 POLDIP3Q9BY77 421 aaKnown RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 SEMA6AQ9H2E6 1030 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 TXNIPQ9H3M7 391 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 C12orf49Q9H741 205 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 B3GAT2Q9NPZ5 323 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 C8orf4Q9NR00 106 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 B3GAT1Q9P2W7 334 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 GRHPRQ9UBQ7 328 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 UPB1Q9UBR1 384 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 SEC14L4Q9UDX3 406 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 ING1Q9UK53 422 aaPredicted RBP6.78□□□□□ -1.32
TDP1-214ENST00000556063 BAIAP2Q9UQB8 552 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 POFUT2Q9Y2G5 429 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 CDH10Q9Y6N8 788 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 NBEAQ8NFP9 2946 aa6.78□□□□□ -1.32
TDP1-214ENST00000556063 HELZ2Q9BYK8 2649 aaKnown RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 ICE1Q9Y2F5 2266 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 SAC3D1A6NKF1 404 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 FAM90A27PA6NNH2 459 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 A8MXE2 369 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 H3BN98 237 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 XKRYO14609 159 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 IMPA2O14732 288 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ARPC3O15145 178 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 IDH3BO43837 385 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 IGHG1P01857 330 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 OSMP13725 252 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ANPEPP15144 967 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 PRKACGP22612 351 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 NOS3P29474 1203 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 PEX19P40855 299 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 CSNK1A1P48729 337 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 PCYT1AP49585 367 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 RAD23AP54725 363 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 BIDP55957 195 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 RPL27P61353 136 aaKnown RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 TGFBR3Q03167 851 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ITGADQ13349 1161 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 TOP3AQ13472 1001 aaPredicted RBP6.77□□□□□ -1.33
TDP1-214ENST00000556063 P2RY6Q15077 328 aa6.77□□□□□ -1.33
TDP1-214ENST00000556063 ACKR1Q16570 336 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms