RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ERLIN2O94905 339 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 NDUFB10O96000 172 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 MOSP00540 346 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 ANXA5P08758 320 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 CHTF8P0CG12 524 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 DLX1P56177 255 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 KCNJ2P63252 427 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 GBE1Q04446 702 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 ORC2Q13416 577 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-213ENST00000554776 UNC119Q13432 240 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 PPP1R7Q15435 360 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 LCN12Q6JVE5 192 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 RNF165Q6ZSG1 346 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 PLA2G4DQ86XP0 818 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 Q8N7P7 452 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 CCDC71LQ8N9Z2 235 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 OR2G2Q8NGZ5 317 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 NEIL3Q8TAT5 605 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 PLPPR1Q8TBJ4 325 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 FRAT1Q92837 279 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-213ENST00000554776 KIFAP3Q92845 792 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 SMARCD2Q92925 531 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 TMEM101Q96IK0 257 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 PANX1Q96RD7 426 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 SORT1Q99523 831 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 TMEM246Q9BRR3 403 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 ROGDIQ9GZN7 287 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 SLC25A22Q9H936 323 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 SIAEQ9HAT2 523 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 ANAPC11Q9NYG5 84 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 CALYQ9NYX4 217 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 PTTG3PQ9NZH4 202 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 STARD10Q9Y365 291 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 MSH6P52701 1360 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 TEX46H3BTG2 121 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CCL21O00585 134 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 DNALI1O14645 258 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-213ENST00000554776 EIF3HO15372 352 aaKnown RBP eCLIP2.14□□□□□ -2.07
SCFD1-213ENST00000554776 FAM189A1O60320 539 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 DNAJB6O75190 326 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 IGHV2-5P01817 119 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 FGGP02679 453 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 ALDOBP05062 364 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 TROVE2P10155 538 aaKnown RBP eCLIP2.14□□□□□ -2.07
SCFD1-213ENST00000554776 ICAM2P13598 275 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 TBPP20226 339 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 HTR1EP28566 365 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 FDFT1P37268 417 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CTRLP40313 264 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CRYBB2P43320 205 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CDKN1BP46527 198 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 PRRX1P54821 245 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CDH6P55285 790 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 GNMTQ14749 295 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CCDC14Q49A88 953 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 XKR7Q5GH72 579 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 OTPQ5XKR4 325 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 LRRC66Q68CR7 880 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CTRB2Q6GPI1 263 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 SLC8B1Q6J4K2 584 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 SASS6Q6UVJ0 657 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 KRTAP11-1Q8IUC1 163 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 MS4A15Q8N5U1 240 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 HSD17B11Q8NBQ5 300 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 SPATA4Q8NEY3 305 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 B3GNT7Q8NFL0 401 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CCDC148Q8NFR7 591 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 ACER1Q8TDN7 264 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 NDRG1Q92597 394 aaKnown RBP2.14□□□□□ -2.07
SCFD1-213ENST00000554776 FCRL1Q96LA6 429 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 IMMP1LQ96LU5 166 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 PLIN2Q99541 437 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 ATP5SQ99766 215 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 SLC29A1Q99808 456 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 ANP32EQ9BTT0 268 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 SRMSQ9H3Y6 488 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 NXF3Q9H4D5 531 aaKnown RBP2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CLMPQ9H6B4 373 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 PDFQ9HBH1 243 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 PLGRKTQ9HBL7 147 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CLCF1Q9UBD9 225 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 RABL2AQ9UBK7 228 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-213ENST00000554776 PITPNC1Q9UKF7 332 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 NEU3Q9UQ49 428 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 SLC25A15Q9Y619 301 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CDH10Q9Y6N8 788 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 CDHR2Q9BYE9 1310 aa2.14□□□□□ -2.07
SCFD1-213ENST00000554776 PLEKHG1Q9ULL1 1385 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 TDRD6O60522 2096 aaKnown RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 IGKV1D-13A0A0B4J2D9 117 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 GJE1A6NN92 205 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 WBP4O75554 376 aaKnown RBP2.13□□□□□ -2.07
SCFD1-213ENST00000554776 BBOX1O75936 387 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 OR2J3O76001 311 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CLIC3O95833 236 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 CRYGBP07316 175 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 IGKV1-13P0DP09 117 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 IFNA8P32881 189 aa2.13□□□□□ -2.07
SCFD1-213ENST00000554776 RORAP35398 523 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms