RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 OTPQ5XKR4 325 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 BICRALQ6AI39 1079 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CARFQ8N187 725 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 OR4D9Q8NGE8 314 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 KISS1RQ969F8 398 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 KTI12Q96EK9 354 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 HYLS1Q96M11 299 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 NMNAT3Q96T66 252 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 TBL1XR1Q9BZK7 514 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 SCPEP1Q9HB40 452 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 DMXL1Q9Y485 3027 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 RAF1P04049 648 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CCL4P13236 92 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 SDHBP21912 280 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 GALNSP34059 522 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 ACY1Q03154 408 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 IL18Q14116 193 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 RNASE12Q5GAN4 147 aaKnown RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 RPTNQ6XPR3 784 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 KCTD7Q96MP8 289 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 LINC00052Q96N35 136 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 TEAD3Q99594 435 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF649Q9BS31 505 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 PPA2Q9H2U2 334 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 CDCP1Q9H5V8 836 aa10.63□□□□□ -0.71
SHMT2-212ENST00000554467 TNRC6BQ9UPQ9 1833 aaKnown RBP10.63□□□□□ -0.71
SHMT2-212ENST00000554467 IQCMA0A1B0GVH7 501 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 H7C1C5 153 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 NUPL2O15504 423 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 TRIM3O75382 744 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 RRASP10301 218 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 GRPRP30550 384 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 HOXA6P31267 233 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 GPR143P51810 404 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 CLDN20P56880 219 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 FBXW4P57775 412 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 LCN6P62502 163 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 FABP5Q01469 135 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 EGR4Q05215 589 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 P2RY14Q15391 338 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 TRILQ7L0X0 811 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ST8SIA4Q92187 359 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 TSSK2Q96PF2 358 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 NPAS1Q99742 590 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 MARVELD1Q9BSK0 173 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 KATNB1Q9BVA0 655 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 MED17Q9NVC6 651 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 MRPS18AQ9NVS2 196 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 MGAT4AQ9UM21 535 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 EXOSC1Q9Y3B2 195 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SIRT4Q9Y6E7 314 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 E9PI62 339 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF670-ZNF695F2Z2N8 137 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF3P17036 446 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SLC6A6P31641 620 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 RBM34P42696 430 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 MAP2K3P46734 347 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 RNF4P78317 190 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 GRK1Q15835 563 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 WBP2NLQ6ICG8 309 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ANKRD37Q7Z713 158 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 CMIPQ8IY22 773 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 GDPD1Q8N9F7 314 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 DUSP19Q8WTR2 217 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ZC3HAV1LQ96H79 300 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SORCS2Q96PQ0 1159 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 USB1Q9BQ65 265 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 UQCC2Q9BRT2 126 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 RBFOX1Q9NWB1 397 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SRPK3Q9UPE1 567 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 TMEM129A0AVI4 362 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 MASP2O00187 686 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SLC30A4O14863 429 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 NDUFB2O95178 105 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 TPOP07202 933 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 PEPDP12955 493 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 CPEP16870 476 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 HK1P19367 917 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 DCDP81605 110 aaKnown RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 LTBQ06643 244 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 DDI2Q5TDH0 399 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SSX6Q7RTT6 188 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ATG4DQ86TL0 474 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-212ENST00000554467 PPP1R3BQ86XI6 285 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ADGRG3Q86Y34 549 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 FAM71CQ8NEG0 241 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 RBP7Q96R05 134 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ARHGAP9Q9BRR9 750 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 SLCO1C1Q9NYB5 712 aa10.62□□□□□ -0.71
SHMT2-212ENST00000554467 NUP210LQ5VU65 1888 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 TRBV11-1A0A0K0K1C0 115 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 DAPL1A0PJW8 107 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 PSMD9O00233 223 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 TSPAN2O60636 221 aa10.61□□□□□ -0.71
SHMT2-212ENST00000554467 TRIQKQ629K1 86 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms