RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NMNAT3Q96T66 252 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 HCAR1Q9BXC0 346 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 C6orf62Q9GZU0 229 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 METTL7AQ9H8H3 244 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 INIPQ9NRY2 104 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 GALNT8Q9NY28 637 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 KLRF1Q9NZS2 232 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PPP4R1LQ9P1A2 415 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PISDQ9UG56 409 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 ADAM30Q9UKF2 790 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 TRAPPC4Q9Y296 219 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 B3GALT5Q9Y2C3 310 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 PTRH2Q9Y3E5 179 aaKnown RBP6.61□□□□□ -1.35
ATXN3-221ENST00000553498 LOXL2Q9Y4K0 774 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 WIF1Q9Y5W5 379 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 FKBP7Q9Y680 259 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 BRWD1Q9NSI6 2320 aa6.61□□□□□ -1.35
ATXN3-221ENST00000553498 NSG1A0A0A6YYJ2 146 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 TEX13CA0A0J9YWL9 993 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 A0A1W2PQL4 384 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 LNP1A1A4G5 178 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 OR6C68A6NDL8 312 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 C21orf140B9A014 251 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 FTCDNL1E5RQL4 147 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 WWP2O00308 870 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 OGG1O15527 345 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 RNF13O43567 381 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 PRKNO60260 465 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 GATBO75879 557 aaKnown RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 SULT1C4O75897 302 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ARL6IP5O75915 188 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 UMODP07911 640 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 COX6A1P12074 109 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 CCL4P13236 92 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 GTF2E2P29084 291 aaKnown RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 CRABP1P29762 137 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 RPS19P39019 145 aaKnown RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 CASP3P42574 277 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 RPS5P46782 204 aaKnown RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 RPL27P61353 136 aaKnown RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ZNF85Q03923 595 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 LTBQ06643 244 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 EGR3Q06889 387 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 SSPNQ14714 243 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 BTBD16Q32M84 506 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 GLYR1Q49A26 553 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 DDI2Q5TDH0 399 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 EEF1A1P5Q5VTE0 462 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 CDCP2Q5VXM1 449 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 DMKNQ6E0U4 476 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 MZT2AQ6P582 158 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 LEG1Q6P5S2 330 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 DNM1P34Q6PK57 102 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 METAP1DQ6UB28 335 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 Q6ZNX1 250 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 CCDC190Q86UF4 302 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ZBTB46Q86UZ6 589 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 IGFN1Q86VF2 1251 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 NAXDQ8IW45 347 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 SLC35F2Q8IXU6 374 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ESX1Q8N693 406 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 EXD3Q8N9H8 876 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 LSM14AQ8ND56 463 aaKnown RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 OR2I1PQ8NGU4 316 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 SNX33Q8WV41 574 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ASB17Q8WXJ9 295 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 THAP4Q8WY91 577 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 KIAA1143Q96AT1 154 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 COX4I2Q96KJ9 171 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 MOGAT1Q96PD6 335 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 RASL10BQ96S79 203 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 SLC30A2Q9BRI3 323 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ALG12Q9BV10 488 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 PTDSS2Q9BVG9 487 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 GPR87Q9BY21 358 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 MROQ9BYG7 248 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 RTN4RQ9BZR6 473 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 TXNIPQ9H3M7 391 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 MED20Q9H944 212 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 MARCH7Q9H992 704 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 SMURF1Q9HCE7 757 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 VSX1Q9NZR4 365 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-221ENST00000553498 ADAM18Q9Y3Q7 739 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 HS3ST3B1Q9Y662 390 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 CROCCQ5TZA2 2017 aa6.6□□□□□ -1.35
ATXN3-221ENST00000553498 DOCK9Q9BZ29 2069 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CCDC187A0A096LP49 1063 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TRAV1-2A0A0B4J238 106 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 LOC102725191A0A1B0GVB3 256 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 A0A1W2PRG6 482 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 TMEM72A0PK05 275 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 PRSS37A4D1T9 235 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 LRRN3E7EW58 273 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 GABRPO00591 440 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 PLPP3O14495 311 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 CASKO14936 926 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 SLC19A2O60779 497 aa6.59□□□□□ -1.35
ATXN3-221ENST00000553498 LRP3O75074 770 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms