RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 NXNQ6DKJ4 435 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 C6orf89Q6UWU4 347 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 GLCCI1Q86VQ1 547 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 COMTD1Q86VU5 262 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 C20orf196Q8IYI0 205 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 SEMA6DQ8NFY4 1073 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 YIPF5Q969M3 257 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 TREM2Q9NZC2 230 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 RPS6KB2Q9UBS0 482 aa12.73□□□□□ -0.37
TMEM106C-216ENST00000551305 A0A1B0GWA3 101 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 M0R233 179 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 OR2T1O43869 369 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 FZD7O75084 574 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 ZNF14P17017 642 aaPredicted RBP12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 PTDSS1P48651 473 aaKnown RBP12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 EVX1P49640 407 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 GSG1Q2KHT4 349 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 UGT2A3Q6UWM9 527 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 ZNF813Q6ZN06 617 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 UEVLDQ8IX04 471 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 OR9I1Q8NGQ6 314 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 SLC38A4Q969I6 547 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 RACGAP1Q9H0H5 632 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 CENPHQ9H3R5 247 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 MED29Q9NX70 200 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 ZNF224Q9NZL3 707 aa12.72□□□□□ -0.37
TMEM106C-216ENST00000551305 TRAV36DV7A0A075B6V5 113 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 LOC102725191A0A1B0GVB3 256 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 TMEM247A6NEH6 219 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 HDAC3O15379 428 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 PATE4P0C8F1 98 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 NAT2P11245 290 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 B4GALT1P15291 398 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 NQO1P15559 274 aaKnown RBP12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 PCMT1P22061 227 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 GLRXP35754 106 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 MFSD13AQ14CX5 517 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 RGNQ15493 299 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 ALKBH6Q3KRA9 238 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 SLC9B1Q4ZJI4 515 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 NHLRC1Q6VVB1 395 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 DEF8Q6ZN54 512 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 ANKRD42Q8N9B4 389 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 RDH5Q92781 318 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 ITCHQ96J02 903 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 LRRC37BQ96QE4 947 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 MS4A5Q9H3V2 200 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 BCL2L10Q9HD36 194 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 ZNF275Q9NSD4 429 aaPredicted RBP12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 KLHL14Q9P2G3 628 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 POFUT2Q9Y2G5 429 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 NOX1Q9Y5S8 564 aa12.71□□□□□ -0.37
TMEM106C-216ENST00000551305 A0A087WUJ7 227 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 TRPC5OSA6NMA1 111 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 LRRN3E7EW58 273 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 SPRY1O43609 319 aaPredicted RBP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 TPST1O60507 370 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 NCR1O76036 304 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 MSMBP08118 114 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 GAAP10253 952 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 IDO1P14902 403 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 GIPRP48546 466 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 RAB1AP62820 205 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 RAB39AQ14964 217 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 FXNQ16595 210 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 ALG10BQ5I7T1 473 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 SLC2A7Q6PXP3 512 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 LSMEM1Q8N8F7 131 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 RMND5AQ9H871 391 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 C12orf10Q9HB07 376 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 THUMPD1Q9NXG2 353 aaKnown RBP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 DUSP13Q9UII6 198 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 GRIP1Q9Y3R0 1128 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 SPEF1Q9Y4P9 236 aa12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
TMEM106C-216ENST00000551305 DYSFO75923 2080 aa12.69□□□□□ -0.38
TMEM106C-216ENST00000551305 A0A0A6YYJ9 748 aa12.69□□□□□ -0.38
TMEM106C-216ENST00000551305 SLCO1B7G3V0H7 640 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms