RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 SNX32Q86XE0 403 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 CDK20Q8IZL9 346 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SCAIQ8N9R8 606 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 MRPL24Q96A35 216 aaKnown RBP11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SLC41A3Q96GZ6 507 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SNX18Q96RF0 628 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 PAIP1Q9H074 479 aaKnown RBP11.09□□□□□ -0.63
PTCH1-221ENST00000550914 MS4A5Q9H3V2 200 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 B3GAT2Q9NPZ5 323 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SPEF1Q9Y4P9 236 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 IGKV1D-42A0A075B6H8 117 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 A0A1B0GWA3 101 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 B4DSR2 109 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 CLIC1O00299 241 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 UBDO15205 165 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 NUDT7P0C024 238 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 KITP10721 976 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF35P13682 527 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF14P17017 642 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-221ENST00000550914 HOXB9P17482 250 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-221ENST00000550914 GLRXP35754 106 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 CAPZA2P47755 286 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 SLC18A1P54219 525 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 GSG1Q2KHT4 349 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 ALG10BQ5I7T1 473 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 ULK3Q6PHR2 472 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 DHRS4L2Q6PKH6 230 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 DEF8Q6ZN54 512 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 MEX3DQ86XN8 651 aaKnown RBP11.08□□□□□ -0.64
PTCH1-221ENST00000550914 KRT73Q86Y46 540 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 UEVLDQ8IX04 471 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 MIER2Q8N344 545 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 ZFAND2BQ8WV99 257 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 MAL2Q969L2 176 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 SLC47A1Q96FL8 570 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF75AQ96N20 296 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 EPYCQ99645 322 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 SPATA5L1Q9BVQ7 753 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 TESQ9UGI8 421 aaKnown RBP11.08□□□□□ -0.64
PTCH1-221ENST00000550914 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 NOX1Q9Y5S8 564 aa11.08□□□□□ -0.64
PTCH1-221ENST00000550914 A0A087WUJ7 227 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 SH3PXD2BA1X283 911 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 MS4A18H0YCH9 400 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 M0R233 179 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 M0R3G1 203 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 HLA-HP01893 362 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 ARAFP10398 606 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 HTR2AP28223 471 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 MRPL19P49406 292 aaKnown RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 RPS23P62266 143 aaKnown RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 MRPS11P82912 194 aaKnown RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 IL1RL1Q01638 556 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 SCGB2A2Q13296 93 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 TRIP10Q15642 601 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 TRMT5Q32P41 509 aaKnown RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 MS4A18Q3C1V0 323 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 KRT80Q6KB66 452 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 REEP3Q6NUK4 255 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 NHLRC1Q6VVB1 395 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 ZNF813Q6ZN06 617 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 ANKRD42Q8N9B4 389 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 BHLHE22Q8NFJ8 381 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 OR9I1Q8NGQ6 314 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 ASPNQ9BXN1 380 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 RSPO3Q9BXY4 272 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 PARD6BQ9BYG5 372 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 MRPL37Q9BZE1 423 aaKnown RBP11.07□□□□□ -0.64
PTCH1-221ENST00000550914 EVA1AQ9H8M9 152 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 SELENONQ9NZV5 590 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 REV1Q9UBZ9 1251 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 GMEB1Q9Y692 573 aa11.07□□□□□ -0.64
PTCH1-221ENST00000550914 TMEM120BA0PK00 339 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 SEC14L2O76054 403 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 HPRP00739 348 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 TFP02787 698 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 CD79AP11912 226 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 NQO1P15559 274 aaKnown RBP11.06□□□□□ -0.64
PTCH1-221ENST00000550914 ITGA2P17301 1181 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 ACHEP22303 614 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 PPIBP23284 216 aaKnown RBP11.06□□□□□ -0.64
PTCH1-221ENST00000550914 TMEM33P57088 247 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 PUDPQ08623 228 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 FXNQ16595 210 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 ELFN2Q5R3F8 820 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 LRIF1Q5T3J3 769 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 MAVSQ7Z434 540 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 PXKQ7Z7A4 578 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 OR52B2Q96RD2 323 aa11.06□□□□□ -0.64
PTCH1-221ENST00000550914 TMEM43Q9BTV4 400 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms