RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 EMC6Q9BV81 110 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 SLCO5A1Q9H2Y9 848 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 REEP1Q9H902 201 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 INIPQ9NRY2 104 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 ASB6Q9NWX5 421 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 MED29Q9NX70 200 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 GPR52Q9Y2T5 361 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 ANKHD1Q8IWZ3 2542 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 TRAV27A0A087WT01 109 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 SLC35F4A4IF30 521 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 GNGT2O14610 69 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 CDC42EP2O14613 210 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 FKBP6O75344 327 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 SLC43A1O75387 559 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 KRT33AO76009 404 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 F13BP05160 661 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 IFNGR1P15260 489 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 IFNGR2P38484 337 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 KIR2DL3P43628 341 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 OMPP47874 163 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 LIMS1P48059 325 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 ITGADQ13349 1161 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 ANKDD1AQ495B1 522 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 ANKRD34AQ69YU3 496 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 YTHDF3Q7Z739 585 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 PAPD5Q8NDF8 572 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 OR13C2Q8NGS9 318 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 SLC24A3Q9HC58 644 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 VNN3Q9NY84 501 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 NDRG3Q9UGV2 375 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 HIF3AQ9Y2N7 669 aa14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 SAMHD1Q9Y3Z3 626 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-209ENST00000550872 A0A1W2PRG6 482 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 OR6C65A6NJZ3 312 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 CLOCKO15516 846 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 ZNF432O94892 652 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 CCNB2O95067 398 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 BCL10O95999 233 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 TSPAN19P0C672 248 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 PSMB1P20618 241 aaKnown RBP14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 IGHV1-2P23083 117 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 IL32P24001 234 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 BIDP55957 195 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 CCNIQ14094 377 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 ZBED5Q49AG3 693 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 ALG10Q5BKT4 473 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 SFRP5Q5T4F7 317 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 CARD17Q5XLA6 110 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 ZNF787Q6DD87 383 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 ZER1Q7Z7L7 766 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 OR4C15Q8NGM1 316 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 KISS1RQ969F8 398 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 SLCO4A1Q96BD0 722 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 OR2M2Q96R28 347 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 MALT1Q9UDY8 824 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 U3KQV3 271 aa14.32□□□□□ -0.12
CHMP1A-209ENST00000550872 CELSR2Q9HCU4 2923 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 UNC119BA6NIH7 251 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 MCIDASD6RGH6 385 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 HNRNPRO43390 633 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 UPK3AO75631 287 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 LYZL6O75951 148 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 DNAJA1P31689 397 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 CCKARP32238 428 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 PRPS1P60891 318 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 RPS4XP62701 263 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 LGALS3BPQ08380 585 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 CAMK2DQ13557 499 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 FHL1Q13642 323 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 MELKQ14680 651 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 C9orf135Q5VTT2 229 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 BHLHA15Q7RTS1 189 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 ABHD12BQ7Z5M8 362 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 TMEM123Q8N131 208 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 GPR137CQ8N3F9 429 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 LINC00471Q8N535 108 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 ZNF433Q8N7K0 673 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 STEAP2Q8NFT2 490 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 GNPDA2Q8TDQ7 276 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 ADAD1Q96M93 576 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 WFIKKN1Q96NZ8 548 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 RAB3IPQ96QF0 476 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 GPA33Q99795 319 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 LINC00470Q9BZP3 86 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 ACTR6Q9GZN1 396 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 CRIM1Q9NZV1 1036 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 CREBBPQ92793 2442 aa14.31□□□□□ -0.12
CHMP1A-209ENST00000550872 CIB4A0PJX0 185 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 SH3D21A4FU49 640 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 ZNF587BE7ETH6 402 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 KLF4O43474 513 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 PTP4A3O75365 173 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 TIPRLO75663 272 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 COX5AP20674 150 aa14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 RPL4P36578 427 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 DAP3P51398 398 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-209ENST00000550872 FOXG1P55316 489 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms