RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 OR2T29Q8NH02 315 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 SMAP2Q8WU79 429 aaPredicted RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 SLC25A43Q8WUT9 341 aaPredicted RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 ZHX1-C8orf76Q96EF9 292 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 MPP4Q96JB8 637 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 FUZQ9BT04 418 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 ZNF426Q9BUY5 554 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 ANKRD19PQ9H560 264 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 CTPS2Q9NRF8 586 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 RPS6KB2Q9UBS0 482 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 DNAJB9Q9UBS3 223 aa11.83□□□□□ -0.52
NUP188-211ENST00000550219 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 SPIN1Q9Y657 262 aaPredicted RBP11.83□□□□□ -0.52
NUP188-211ENST00000550219 A0A087WUJ7 227 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 DPRXA6NFQ7 191 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 TIPRLO75663 272 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 RAD51DO75771 328 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 KRT36O76013 467 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 CST1P01037 141 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 H1F0P07305 194 aaKnown RBP11.82□□□□□ -0.52
NUP188-211ENST00000550219 PNMTP11086 282 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 FCGR1AP12314 374 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 PTNP21246 168 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 IGHV1-2P23083 117 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 FASP25445 335 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 IFNA8P32881 189 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 LIMS1P48059 325 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 SMIM11AP58511 58 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 GK3PQ14409 553 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 ATP6AP1Q15904 470 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 ALG10BQ5I7T1 473 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 TMPPEQ6ZT21 453 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 MUCL1Q96DR8 90 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 FNDC11Q9BVV2 318 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 OR11A1Q9GZK7 315 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 VNN3Q9NY84 501 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 NPAP1Q9NZP6 1156 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 EMC3Q9P0I2 261 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 CHRNA9Q9UGM1 479 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 SLC7A7Q9UM01 511 aa11.82□□□□□ -0.52
NUP188-211ENST00000550219 FN1P02751 2386 aaKnown RBP11.82□□□□□ -0.52
NUP188-211ENST00000550219 TMED7-TICAM2A0A0A6YYA0 188 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 A0A1W2PR80 420 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 CIB4A0PJX0 185 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 ZNF724A8MTY0 619 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 ABCD4O14678 606 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 RAMP1O60894 148 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
NUP188-211ENST00000550219 DANCRP0C864 163 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 COX5AP20674 150 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 FKBP2P26885 142 aaKnown RBP11.81□□□□□ -0.52
NUP188-211ENST00000550219 RRM2P31350 389 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 ACVR1BP36896 505 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 OR2B6P58173 313 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 TRAM2Q15035 370 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 NKAIN4Q8IVV8 208 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 OR4C15Q8NGM1 316 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 OR52N5Q8NH56 324 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 SLC7A13Q8TCU3 470 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 LRTOMTQ8WZ04 291 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 STMN2Q93045 179 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 ARL5BQ96KC2 179 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 HS6ST2Q96MM7 605 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 USB1Q9BQ65 265 aaKnown RBP11.81□□□□□ -0.52
NUP188-211ENST00000550219 TMEM43Q9BTV4 400 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 NTN4Q9HB63 628 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 SELENONQ9NZV5 590 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 RHCGQ9UBD6 479 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 POU2F3Q9UKI9 436 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 NOSIPQ9Y314 301 aaKnown RBP11.81□□□□□ -0.52
NUP188-211ENST00000550219 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 LYVE1Q9Y5Y7 322 aa11.81□□□□□ -0.52
NUP188-211ENST00000550219 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
NUP188-211ENST00000550219 ARID1AO14497 2285 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 IGKV1D-42A0A075B6H8 117 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 H0YHG0 523 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 OVOL3O00110 214 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 ZNF208O43345 1280 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 MGRN1O60291 552 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 NPIPB7O75200 414 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 NDUFS7O75251 213 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 GADD45GO95257 159 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 IGF2P01344 180 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 IGHV4-39P01824 125 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 IDUAP35475 653 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 RBM34P42696 430 aaKnown RBP11.8□□□□□ -0.52
NUP188-211ENST00000550219 ZNF83P51522 516 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 SPIBQ01892 262 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 SPOCK1Q08629 439 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 RIPK1Q13546 671 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 PGGHGQ32M88 737 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 TIMM23BQ5SRD1 257 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 HMBOX1Q6NT76 420 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 CASP12Q6UXS9 341 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 PQLC1Q8N2U9 271 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 PIGXQ8TBF5 258 aa11.8□□□□□ -0.52
NUP188-211ENST00000550219 STK35Q8TDR2 534 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms