RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RAB36O95755 333 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 PTHP01270 115 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 SAGP10523 405 aaPredicted RBP17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC6A6P31641 620 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC1A3P43003 542 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 GAS1P54826 345 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 CRYZQ08257 329 aaKnown RBP17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 EXT1Q16394 746 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 DEFB113Q30KQ7 82 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 ANKDD1AQ495B1 522 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 ARMC4Q5T2S8 1044 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 ARSKQ6UWY0 536 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 OAFQ86UD1 273 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 GID4Q8IVV7 300 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 PROKR2Q8NFJ6 384 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 OR13C2Q8NGS9 318 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 RNF138Q8WVD3 245 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 TBL1XR1Q9BZK7 514 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 MMP25Q9NPA2 562 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 TIMMDC1Q9NPL8 285 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 CMC2Q9NRP2 79 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 HRNRQ86YZ3 2850 aaPredicted RBP17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 STAB1Q9NY15 2570 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ELOA3DA6NLF2 546 aaPredicted RBP17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 KPNA4O00629 521 aaPredicted RBP17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ZFAND5O76080 213 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 PGCP20142 388 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ROR2Q01974 943 aaKnown RBP17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ZNF117Q03924 483 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 FHL1Q13642 323 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ELOA3BQ3SY89 546 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 CBLN3Q6UW01 205 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 PAMR1Q6UXH9 720 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC46A3Q7Z3Q1 461 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 NANOGP1Q8N7R0 232 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 GATSQ8NAP1 163 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ELOA3Q8NG57 546 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 OR52I1Q8NGK6 324 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 OR5W2Q8NH69 310 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 MND1Q9BWT6 205 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 JAM3Q9BX67 310 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 ERGIC3Q9Y282 383 aa17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 LSM2Q9Y333 95 aaKnown RBP17.92■□□□□ 0.46
CTDSP2-204ENST00000548823 A0A1W2PPW3 197 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 CDC40O60508 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 OR7A10O76100 309 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 RAF1P04049 648 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 CD36P16671 472 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 HTR1FP30939 366 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 EVI2BP34910 448 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 PEX19P40855 299 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 MTNR1AP48039 350 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 P2RX1P51575 399 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 BCDIN3DQ7Z5W3 292 aaKnown RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC15A4Q8N697 577 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 LGALS12Q96DT0 336 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 H2AFY2Q9P0M6 372 aaPredicted RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 EXOGQ9Y2C4 368 aaKnown RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 EXOSC1Q9Y3B2 195 aaKnown RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 ZNF337Q9Y3M9 751 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 DNAJC13O75165 2243 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 IGKV1D-42A0A075B6H8 117 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 TRBV11-1A0A0K0K1C0 115 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 NDUFB2O95178 105 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 LY6G6DO95868 133 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 ADRA2AP08913 450 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 PEPDP12955 493 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 LIPAP38571 399 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 KIR2DL3P43628 341 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 CDH11P55287 796 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 SUMO3P55854 103 aaPredicted RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 CBFBQ13951 182 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 EMC4Q5J8M3 183 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 ZNF468Q5VIY5 522 aaPredicted RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 ARHGAP11AQ6P4F7 1023 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 THSD4Q6ZMP0 1018 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 MARCH3Q86UD3 253 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 TMCO5AQ8N6Q1 288 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 HGDQ93099 445 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 TMCO6Q96DC7 493 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 RNFT2Q96EX2 444 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 TNFRSF13CQ96RJ3 184 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 HINT3Q9NQE9 182 aaKnown RBP17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 PLSCR2Q9NRY7 297 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 GPR52Q9Y2T5 361 aa17.91■□□□□ 0.46
CTDSP2-204ENST00000548823 HCRTR2O43614 444 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 IDH3BO43837 385 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 CH25HO95992 272 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 BCL10O95999 233 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 HK1P19367 917 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 FUT1P19526 365 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 TMED10P49755 219 aaKnown RBP17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 CCR4P51679 360 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 RPS4XP62701 263 aaKnown RBP17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 DYNC1I2Q13409 638 aaKnown RBP17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 ARMCX4Q5H9R4 360 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 OR5M3Q8NGP4 307 aa17.9■□□□□ 0.46
CTDSP2-204ENST00000548823 ZNF563Q8TA94 476 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms