RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 ADAMTS20P59510 1910 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ARPC3O15145 178 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 PLA2G10O15496 165 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 ZFPL1O95159 310 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 PTTG1O95997 202 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 APOA1P02647 267 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 BGLAPP02818 100 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 OR2T7P0C7T2 308 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 PGCP20142 388 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.86e-6■■■■■ 44.3
CUX1-212ENST00000547394 FMODQ06828 376 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 SELENBP1Q13228 472 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 BIKQ13323 160 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 SQSTM1Q13501 440 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 CDK5R1Q15078 307 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81e-6■■■■■ 31.5
CUX1-212ENST00000547394 STPG1Q5TH74 334 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 DNAAF1Q8NEP3 725 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 NFAM1Q8NET5 270 aaPredicted RBP10.02□□□□□ -0.8
CUX1-212ENST00000547394 OR51A4Q8NGJ6 313 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 OR2T27Q8NH04 317 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 AP3S1Q92572 193 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 GFM1Q96RP9 751 aaKnown RBP10.02□□□□□ -0.8
CUX1-212ENST00000547394 TMEM43Q9BTV4 400 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 JAM3Q9BX67 310 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 KCNN2Q9H2S1 579 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 HAO2Q9NYQ3 351 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 SRPK3Q9UPE1 567 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 UGT2A1Q9Y4X1 527 aa10.02□□□□□ -0.8
CUX1-212ENST00000547394 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.81
CUX1-212ENST00000547394 EML6Q6ZMW3 1958 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 GLCEO94923 617 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 GUSBP08236 651 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 ADRB1P08588 477 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 TFPIP10646 304 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 KLK2P20151 261 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 GBX2P52951 348 aaPredicted RBP10.02□□□□□ -0.81
CUX1-212ENST00000547394 NRG3P56975 720 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 LGALS3BPQ08380 585 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 CBFBQ13951 182 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 OR7A5Q15622 319 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 HYAL4Q2M3T9 481 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 HES5Q5TA89 166 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 C1orf140Q5VVS0 124 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 KMT5CQ86Y97 462 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 GPALPP1Q8IXQ4 340 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 YIPF7Q8N8F6 280 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 PLPP5Q8NEB5 264 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 RGP1Q92546 391 aaPredicted RBP10.02□□□□□ -0.81
CUX1-212ENST00000547394 SLC35B4Q969S0 331 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 WDFY2Q96P53 400 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 CCDC32Q9BV29 185 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 EMC6Q9BV81 110 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 SP140LQ9H930 580 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 NOX4Q9NPH5 578 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 EXOSC3Q9NQT5 275 aaKnown RBP10.02□□□□□ -0.81
CUX1-212ENST00000547394 MED29Q9NX70 200 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 ANKRD10Q9NXR5 420 aa10.02□□□□□ -0.81
CUX1-212ENST00000547394 A0A0G2JK05 382 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 SLC16A7O60669 478 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 ATF1P18846 271 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 MYL9P24844 172 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 THBS2P35442 1172 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 NR4A2P43354 598 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 SRP9P49458 86 aaKnown RBP10.01□□□□□ -0.81
CUX1-212ENST00000547394 EVX1P49640 407 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 P2RX1P51575 399 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 PNLIPRP2P54317 469 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 ACTC1P68032 377 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 ACTA1P68133 377 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 BTBD16Q32M84 506 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 LIPNQ5VXI9 398 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 LRRN1Q6UXK5 716 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 C1orf210Q8IVY1 113 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 SERPINA12Q8IW75 414 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 TRMT10AQ8TBZ6 339 aaKnown RBP10.01□□□□□ -0.81
CUX1-212ENST00000547394 SLC19A3Q9BZV2 496 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 MRM2Q9UI43 246 aaKnown RBP10.01□□□□□ -0.81
CUX1-212ENST00000547394 POLHQ9Y253 713 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 TRAV36DV7A0A075B6V5 113 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 PIN1P1O15428 100 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 PTHLHP12272 177 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 TDGF1P13385 188 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 CTLA4P16410 223 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 F8A1P23610 371 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 HOXD12P35452 270 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 OR2B6P58173 313 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 DCAF7P61962 342 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 RPS18P62269 152 aaKnown RBP10.01□□□□□ -0.81
CUX1-212ENST00000547394 FOXF1Q12946 379 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 CDONQ4KMG0 1287 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 XKRXQ6PP77 449 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 OVCH1Q7RTY7 1134 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 RABEPKQ7Z6M1 372 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 IL17RDQ8NFM7 739 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 MR1Q95460 341 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
CUX1-212ENST00000547394 SMIM19Q96E16 107 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 ZFP3Q96NJ6 502 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms