RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PRAMEF14Q5SWL7 426 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR10K2Q6IF99 312 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 PLBD1Q6P4A8 553 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CD200R1LQ6Q8B3 271 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 FAM111BQ6SJ93 734 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OLIG3Q7RTU3 272 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 C6orf120Q7Z4R8 191 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 FAM26EQ8N5C1 309 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR4A4PQ8NGN8 299 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR5P2Q8WZ92 322 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MTIF3Q9H2K0 278 aaKnown RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 ASCL3Q9NQ33 180 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CHRNA9Q9UGM1 479 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 ZNF230Q9UIE0 474 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 SC5DO75845 299 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 UBL3O95164 117 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 IFNA10P01566 189 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 LINC00271P0C7V0 271 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 SAGP10523 405 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 SLC2A1P11166 492 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CPN1P15169 458 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 LAG3P18627 525 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 C5AR1P21730 350 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MMP11P24347 488 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MAGEB1P43366 347 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CARD18P57730 90 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 TEAD2Q15562 447 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 SYPL1Q16563 259 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 KHDRBS2Q5VWX1 349 aaKnown RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 KIAA1161Q6NSJ0 714 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CNKSR3Q6P9H4 555 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 PODNL1Q6PEZ8 512 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 TSSK4Q6SA08 328 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 LCTLQ6UWM7 567 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CD300LDQ6UXZ3 194 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 ABHD13Q7L211 337 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 TRAPPC5Q8IUR0 188 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MORN4Q8NDC4 146 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR5AR1Q8NGP9 310 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR1J4Q8NGS1 313 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 RGMAQ96B86 450 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 LINC00615Q96LM1 132 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 ZNF582Q96NG8 517 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 MENTQ9BUN1 341 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 NRSN2Q9GZP1 204 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 DUSP15Q9H1R2 295 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR52A5Q9H2C5 316 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBR1-202ENST00000546274 ZSCAN32Q9NX65 697 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 TAS2R5Q9NYW4 299 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 GDF2Q9UK05 429 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 PYCARD-AS1I3L0S3 204 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 M0R3H8 397 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 TMPRSS11DO60235 418 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 SFTA3P0C7M3 94 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 SLC35G4P0C7Q5 338 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 ERGP11308 486 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 RPA2P15927 270 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 XPAP23025 273 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 CD96P40200 585 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 GLP1RP43220 463 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 RPS10P46783 165 aaKnown RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 MMP15P51511 669 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MANFP55145 182 aaKnown RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 PITPNAQ00169 270 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 CDK5Q00535 292 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MESP2Q0VG99 397 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 TAF13Q15543 124 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 INPP5JQ15735 1006 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 FAM189A2Q15884 450 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 ZNF77Q15935 545 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 RPE65Q16518 533 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 FNDC3BQ53EP0 1204 aaKnown RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 TMEM35AQ53FP2 167 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 HACD4Q5VWC8 232 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 ACSM5Q6NUN0 579 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 PSRC1Q6PGN9 363 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 ZNF227Q86WZ6 799 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 AMER3Q8N944 861 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 OR5D16Q8NGK9 328 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 SPRYD4Q8WW59 207 aaPredicted RBP7.22□□□□□ -1.25
UBR1-202ENST00000546274 ROBO4Q8WZ75 1007 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 IP6K3Q96PC2 410 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 NRIP2Q9BQI9 281 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 MS4A8Q9BY19 250 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 PLA2G12AQ9BZM1 189 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 PRO3102Q9H379 93 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 C19orf12Q9NSK7 152 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 PARPBPQ9NWS1 579 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
UBR1-202ENST00000546274 DNAH14Q0VDD8 3507 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 A6NNC1 897 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 HOXB5P09067 269 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 QDPRP09417 244 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 OR8G3PP0DMU2 310 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 HOXA5P20719 270 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 THBS2P35442 1172 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 CDX1P47902 265 aaPredicted RBP7.21□□□□□ -1.25
UBR1-202ENST00000546274 FUT5Q11128 374 aa7.21□□□□□ -1.25
UBR1-202ENST00000546274 ZNHIT3Q15649 155 aaPredicted RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms