RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZNF860A6NHJ4 632 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ATP6V1G2-DDX39BF2Z307 99 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 IMPA2O14732 288 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ABHD16AO95870 558 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 MELTFP08582 738 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 SLC35E2P0CK97 266 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ZNF35P13682 527 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 POU3F2P20265 443 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 ITPKBP27987 946 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 CSF2RBP32927 897 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 RPS15P62841 145 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 PSG6Q00889 435 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 TOMM20Q15388 145 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 STPG1Q5TH74 334 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ZNF776Q68DI1 518 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 ANKRD16Q6P6B7 361 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 TMPRSS12Q86WS5 348 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 LSRQ86X29 649 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 CA13Q8N1Q1 262 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 SDR16C5Q8N3Y7 309 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 EXD3Q8N9H8 876 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 OR52R1Q8NGF1 315 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 OR5M1Q8NGP8 315 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 OR1S1Q8NH92 325 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 HMGB4Q8WW32 186 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 LIPHQ8WWY8 451 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 EDAQ92838 391 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 RIT1Q92963 219 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 CCDC74AQ96AQ1 378 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 RASD2Q96D21 266 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 B3GNT4Q9C0J1 378 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ALX4Q9H161 411 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 TSPAN10Q9H1Z9 355 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 SLC25A32Q9H2D1 315 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 SLC17A5Q9NRA2 495 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 STEAP1Q9UHE8 339 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ATG2AQ2TAZ0 1938 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 SPTBP11277 2137 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 FXYD6-FXYD2A0A087WZ82 144 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 GGT3PA6NGU5 568 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 TMEM212A6NML5 194 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ANXA2P2A6NMY6 339 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 TTLL8A6PVC2 850 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 PRR32B1ATL7 298 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 IDSB3KWA1 339 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 D6RAR5 112 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ANXA2P07355 339 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 UBBP0CG47 229 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 UBCP0CG48 685 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 AKAIN1P0CW23 69 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 MPGP29372 298 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 TPMTP51580 245 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 MAZP56270 477 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 RPS27AP62979 156 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 UBA52P62987 128 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 TSSK4Q6SA08 328 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 JAZF1Q86VZ6 243 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ZNF440Q8IYI8 595 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 OR52H1Q8NGJ2 320 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 OR52B4Q8NGK2 314 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ZPLD1Q8TCW7 415 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 DOK4Q8TEW6 326 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 ZNF296Q8WUU4 475 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 ANKRD9Q96BM1 317 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 ARSGQ96EG1 525 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 OR1F2PQ96R84 312 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 G6PC3Q9BUM1 346 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 C1QTNF6Q9BXI9 259 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 FXYD6Q9H0Q3 95 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 DNTTIP1Q9H147 329 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 TRPV4Q9HBA0 871 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 CYB5R1Q9UHQ9 305 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 MRM2Q9UI43 246 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 MRPS2Q9Y399 296 aaKnown RBP7.98□□□□□ -1.13
TDP1-204ENST00000545686 CACNA1IQ9P0X4 2223 aa7.98□□□□□ -1.13
TDP1-204ENST00000545686 H0YGG7 62 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 GOSR2O14653 212 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 SDC3O75056 442 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 EML2O95834 649 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 IGKV1D-16P01601 117 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 GJA4P35212 333 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 RAB38P57729 211 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 ARF3P61204 181 aaPredicted RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 ERVK-25P63136 954 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 EGR3Q06889 387 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 PRRT3Q5FWE3 981 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 LIPNQ5VXI9 398 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 ZNF660Q6AZW8 331 aaPredicted RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 LEG1Q6P5S2 330 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 PSRC1Q6PGN9 363 aaPredicted RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 RNF44Q7L0R7 432 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 CDC20BQ86Y33 519 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 ZDHHC1Q8WTX9 485 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 CCDC107Q8WV48 283 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 TNFAIP8L1Q8WVP5 186 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 COMMD4Q9H0A8 199 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 C1orf198Q9H425 327 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 APMAPQ9HDC9 416 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 EXOSC3Q9NQT5 275 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms