RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 PITPNAQ00169 270 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ETFDHQ16134 617 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 MEP1BQ16820 701 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 CD276Q5ZPR3 534 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 LRRN1Q6UXK5 716 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 STAC2Q6ZMT1 411 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 Q6ZS52 159 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 OR6V1Q8N148 313 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ZNF563Q8TA94 476 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ELMOD3Q96FG2 381 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.7□□□□□ -0.22
USP28-214ENST00000545540 TAS2R10Q9NYW0 307 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ABRACLQ9P1F3 81 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 SERTAD3Q9UJW9 196 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ZNF281Q9Y2X9 895 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 RWDD3Q9Y3V2 267 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 A0A087WUJ7 227 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 FOXS1O43638 330 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 AKR7A3O95154 331 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 SERPINA3P01011 423 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 LIPCP11150 499 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 DPP4P27487 766 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 PTH2RP49190 550 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 GFERP55789 205 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 LINC01590Q5TEZ4 76 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 PXDC1Q5TGL8 231 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 MEIOBQ8N635 442 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 ZNF676Q8N7Q3 588 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 TMEM106AQ96A25 262 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
USP28-214ENST00000545540 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 CLEC4MQ9H2X3 399 aaPredicted RBP13.7□□□□□ -0.22
USP28-214ENST00000545540 EMC7Q9NPA0 242 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 SLC22A13Q9Y226 551 aa13.7□□□□□ -0.22
USP28-214ENST00000545540 TRAV1-2A0A0B4J238 106 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 NUPL2O15504 423 aaKnown RBP13.69□□□□□ -0.22
USP28-214ENST00000545540 KCNJ13O60928 360 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 SDC3O75056 442 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 MYF5P13349 255 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 GRK6P43250 576 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 P2RX1P51575 399 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 RAB38P57729 211 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 ACTA2P62736 377 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 ACTG2P63267 376 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 PUDPQ08623 228 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 ALG10Q5BKT4 473 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 PWWP2BQ6NUJ5 590 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 PM20D2Q8IYS1 436 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 OR56B4Q8NH76 319 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 ZDHHC1Q8WTX9 485 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 NXPE2Q96DL1 559 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 GINS4Q9BRT9 223 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 TPSD1Q9BZJ3 242 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 HAO2Q9NYQ3 351 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 SPEF1Q9Y4P9 236 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 CSN2P05814 226 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 GAAP10253 952 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 APEHP13798 732 aaKnown RBP13.69□□□□□ -0.22
USP28-214ENST00000545540 MST1P26927 711 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 LCN1P31025 176 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 ALKAL2Q6UX46 152 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 C16orf47Q6ZP98 133 aaPredicted RBP13.69□□□□□ -0.22
USP28-214ENST00000545540 OR5M1Q8NGP8 315 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 OR5AK2Q8NH90 309 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 LRRC20Q8TCA0 184 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 FCAMRQ8WWV6 532 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 KCNG2Q9UJ96 466 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 URB1O60287 2271 aaKnown RBP13.69□□□□□ -0.22
USP28-214ENST00000545540 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
USP28-214ENST00000545540 MEIKINA0A087WXM9 373 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 KRT33AO76009 404 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 PDGFAP04085 211 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 TPOP07202 933 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 KIAA1024LP59773 190 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 HYAL1Q12794 435 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 TRAM1Q15629 374 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 TSLPQ969D9 159 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 TGM7Q96PF1 710 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 LPAR4Q99677 370 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 C14orf105Q9NVL8 296 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 SCML1Q9UN30 329 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 PYCARD-AS1I3L0S3 204 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 THEGLP0DJG4 465 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 EGR4Q05215 589 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 LGALS3BPQ08380 585 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 DMRTC1Q5HYR2 192 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 OR10K2Q6IF99 312 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 PLPP7Q8NBV4 271 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 PHOSPHO2Q8TCD6 241 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 NSMAFQ92636 917 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 S100A16Q96FQ6 103 aaKnown RBP13.68□□□□□ -0.22
USP28-214ENST00000545540 GABRG3Q99928 467 aa13.68□□□□□ -0.22
USP28-214ENST00000545540 CHST6Q9GZX3 395 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms