RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MPEG1Q2M385 716 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 PRAMEF9Q5VWM5 478 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 SFXN4Q6P4A7 337 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 LANCL3Q6ZV70 420 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 OR13F1Q8NGS4 319 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 C8orf44Q96CB5 159 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 MICU1Q9BPX6 476 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 TMEM59Q9BXS4 323 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 NRIP3Q9NQ35 241 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 TTC3P53804 2025 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ABHD16AO95870 558 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 HSD17B7P56937 341 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 BTG2P78543 158 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
CHD4-211ENST00000544484 MIB2Q96AX9 1013 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 SDF2Q99470 211 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 C12orf49Q9H741 205 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 GALNT9Q9HCQ5 603 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 LYRM4Q9HD34 91 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ASIC5Q9NY37 505 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 LRFN1Q9P244 771 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 TNRC6CQ9HCJ0 1690 aaKnown RBP11.8□□□□□ -0.52
CHD4-211ENST00000544484 PRAMEF25A6NGN4 478 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 A8MVM7 634 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ZNF136P52737 540 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 MANEAQ5SRI9 462 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ZNF684Q5T5D7 378 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 C1orf140Q5VVS0 124 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ANKRD34AQ69YU3 496 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 KDM4DQ6B0I6 523 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 HBMQ6B0K9 141 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 NPSR1Q6W5P4 371 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 ZNF813Q6ZN06 617 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 OR7G2Q8NG99 324 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 SELENOIQ9C0D9 397 aa11.8□□□□□ -0.52
CHD4-211ENST00000544484 A0A1B0GTL3 188 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 SLC16A6O15403 523 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 LIPAP38571 399 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 LUMP51884 338 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 IKZF1Q13422 519 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 Q499Y3 187 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 FAM219BQ5XKK7 198 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 OR7G1Q8NGA0 311 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 GIMAP1Q8WWP7 306 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 GAB3Q8WWW8 586 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 FCMRO60667 390 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 METAP1P53582 386 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 RAB4BP61018 213 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 POU4F3Q15319 338 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 SLX4IPQ5VYV7 408 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 Q6ZNB5 142 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 FGGYQ96C11 551 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 PIGQQ9BRB3 760 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 FAM166BA8MTA8 275 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 DPM1O60762 260 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 ZNF780AO75290 641 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 ETHE1O95571 254 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 IGHEP01854 428 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 GDNFP39905 211 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 GPLD1P80108 840 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 ASTLQ6HA08 431 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 CYHR1Q6ZMK1 362 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 MRPS28Q9Y2Q9 187 aaKnown RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 EVI2BP34910 448 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 OLIG1Q8TAK6 271 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 C7orf50Q9BRJ6 194 aaKnown RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 GCM1Q9NP62 436 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 LTB4R2Q9NPC1 389 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 LGI1O95970 557 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 MYF5P13349 255 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 BLVRBP30043 206 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 DLX5P56178 289 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 TAS2R20P59543 309 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 SAXO2Q658L1 398 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 DCXRQ7Z4W1 244 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 RPS19BP1Q86WX3 136 aaKnown RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 ZNF419Q96HQ0 510 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 FER1L6-AS2Q96M78 137 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 DCLRE1CQ96SD1 692 aaKnown RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 OR52A5Q9H2C5 316 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 COA3Q9Y2R0 106 aaPredicted RBP11.79□□□□□ -0.52
CHD4-211ENST00000544484 CORINQ9Y5Q5 1042 aa11.79□□□□□ -0.52
CHD4-211ENST00000544484 A0A0U1RQK1 487 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 TSPAN11A1L157 253 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 TARM1B6A8C7 271 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 CYB561P49447 251 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 ELAVL1Q15717 326 aaKnown RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 C5orf46Q6UWT4 87 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 ZNF767PQ75MW2 155 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 SLC7A5P1Q8MH63 180 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 C17orf50Q8WW18 174 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 RAB3CQ96E17 227 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms