RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LYZL6O75951 148 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 KRT36O76013 467 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 CNOT4O95628 575 aaKnown RBP13.31□□□□□ -0.28
CD9-210ENST00000543916 IFNGR1P15260 489 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 PSMB1P20618 241 aaKnown RBP13.31□□□□□ -0.28
CD9-210ENST00000543916 KIR2DL3P43628 341 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 SLC9A3P48764 834 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 MELKQ14680 651 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 P2RY6Q15077 328 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 SFRP5Q5T4F7 317 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 ANKRD34AQ69YU3 496 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 C22orf34Q6ZV56 151 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 SLC35D2Q76EJ3 337 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 LINGO2Q7L985 606 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 ZER1Q7Z7L7 766 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 OAFQ86UD1 273 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 ANKK1Q8NFD2 765 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 OR51A7Q8NH64 312 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 MCCC2Q9HCC0 563 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 INIPQ9NRY2 104 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
CD9-210ENST00000543916 ASB6Q9NWX5 421 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 CRIM1Q9NZV1 1036 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 UPB1Q9UBR1 384 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 TMCC3Q9ULS5 477 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 CELSR2Q9HCU4 2923 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 SH3D21A4FU49 640 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 TUBAL3A6NHL2 446 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 PDLIM1O00151 329 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 CLOCKO15516 846 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
CD9-210ENST00000543916 OR10H3O60404 316 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 SLC43A1O75387 559 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 UPK3AO75631 287 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 CST1P01037 141 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 ITGA5P08648 1049 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 ZNF26P17031 533 aaPredicted RBP13.3□□□□□ -0.28
CD9-210ENST00000543916 PEX19P40855 299 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 BIDP55957 195 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 ITGADQ13349 1161 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 C9orf135Q5VTT2 229 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 CARD17Q5XLA6 110 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 IGFN1Q86VF2 1251 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 ZNF433Q8N7K0 673 aaPredicted RBP13.3□□□□□ -0.28
CD9-210ENST00000543916 LRRC75AQ8NAA5 344 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 POMGNT2Q8NAT1 580 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 OR9Q2Q8NGE9 314 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 MARVELD3Q96A59 401 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 WFIKKN1Q96NZ8 548 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 ALKBH3Q96Q83 286 aaPredicted RBP13.3□□□□□ -0.28
CD9-210ENST00000543916 LINC00470Q9BZP3 86 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 ACTR6Q9GZN1 396 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 REEP1Q9H902 201 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 GPR52Q9Y2T5 361 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 SAMHD1Q9Y3Z3 626 aaKnown RBP13.3□□□□□ -0.28
CD9-210ENST00000543916 U3KQV3 271 aa13.3□□□□□ -0.28
CD9-210ENST00000543916 DCHS2Q6V1P9 2916 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 HOXB6P17509 224 aaKnown RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 DNAJA1P31689 397 aaKnown RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 IST1P53990 364 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 FXYD6P3P58550 94 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 GABPB1Q06547 395 aaPredicted RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 CAMK2DQ13557 499 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 ZBED5Q49AG3 693 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 ALG10Q5BKT4 473 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 PHYHD1Q5SRE7 291 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 ZNF770Q6IQ21 691 aaPredicted RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 PGBD2Q6P3X8 592 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 BHLHA15Q7RTS1 189 aaPredicted RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 YTHDF3Q7Z739 585 aaKnown RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 ZNF295-AS1Q8N0V1 137 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 KISS1RQ969F8 398 aaPredicted RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 S100PBPQ96BU1 408 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 KRCC1Q9NPI7 259 aaPredicted RBP13.29□□□□□ -0.28
CD9-210ENST00000543916 KCNN3Q9UGI6 736 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
CD9-210ENST00000543916 A0A1W2PRG6 482 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 OR6C65A6NJZ3 312 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 MCIDASD6RGH6 385 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 PTP4A3O75365 173 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 TIPRLO75663 272 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 KRT33AO76009 404 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 CCNB2O95067 398 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 THBDP07204 575 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 IL32P24001 234 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 FPR3P25089 353 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 GSSP48637 474 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 ACKR1Q16570 336 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 ANKDD1AQ495B1 522 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 C1orf94Q6P1W5 598 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 TMEM179BQ7Z7N9 219 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 C20orf196Q8IYI0 205 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 STEAP2Q8NFT2 490 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 OR6X1Q8NH79 312 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 FAM222BQ8WU58 562 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
CD9-210ENST00000543916 DUS3LQ96G46 650 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms