RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 GNG8Q9UK08 70 aa12.79□□□□□ -0.36
LDB3-207ENST00000542786 TRAV1-2A0A0B4J238 106 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 A0A1W2PRG6 482 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 TMEM221A6NGB7 291 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 M0R296 226 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 UPK3AO75631 287 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 SLC25A12O75746 678 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 KLF7O75840 302 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 AKR7A3O95154 331 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 SYPP08247 313 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 CSF3P09919 207 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 UCHL1P09936 223 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 PSMB10P40306 273 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 RFX2P48378 723 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 OR10A3P58181 314 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 NANOS3P60323 173 aaKnown RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 RIN1Q13671 783 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ACKR1Q16570 336 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 FAM199XQ6PEV8 388 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 FAM131AQ6UXB0 335 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 GDPD1Q8N9F7 314 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 OR10G3Q8NGC4 313 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ZNF417Q8TAU3 575 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 THAP4Q8WY91 577 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 RGP1Q92546 391 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 IMMP1LQ96LU5 166 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 SYT4Q9H2B2 425 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 VSX1Q9NZR4 365 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 MRM2Q9UI43 246 aaKnown RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 A0A1W2PQ09 198 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 FABP12A6NFH5 140 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 EFNA2O43921 213 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 OR2J2O76002 312 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 AHSA1O95433 338 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ZNF883P0CG24 379 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 IL11P20809 199 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ACP1P24666 158 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 RANBP1P43487 201 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 RPL27P61353 136 aaKnown RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 NTRK2Q16620 822 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 CEP78Q5JTW2 689 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 TCEAL6Q6IPX3 200 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 METAP1DQ6UB28 335 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 TRILQ7L0X0 811 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 PM20D2Q8IYS1 436 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 OR8H2Q8N162 312 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ACOT12Q8WYK0 555 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 TCEAL3Q969E4 200 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 SLC25A36Q96CQ1 311 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 NTNG2Q96CW9 530 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 UBL7Q96S82 380 aaPredicted RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 TTYH2Q9BSA4 534 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ZNF700Q9H0M5 742 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 TXNIPQ9H3M7 391 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 ZCCHC4Q9H5U6 513 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 SRA1Q9HD15 236 aaKnown RBP12.78□□□□□ -0.36
LDB3-207ENST00000542786 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 MED11Q9P086 117 aa12.78□□□□□ -0.36
LDB3-207ENST00000542786 COL6A3P12111 3177 aa12.77□□□□□ -0.36
LDB3-207ENST00000542786 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 PRSS37A4D1T9 235 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 C11orf98E9PRG8 122 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 RENP00797 406 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 HLA-DQB1P01920 261 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 GP1BAP07359 652 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 HNRNPCP07910 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
LDB3-207ENST00000542786 ALOX5APP20292 161 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.37
LDB3-207ENST00000542786 APOBEC1P41238 236 aaKnown RBP12.77□□□□□ -0.37
LDB3-207ENST00000542786 DEFA1P59665 94 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 DEFA3P59666 94 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 INSM1Q01101 510 aaPredicted RBP12.77□□□□□ -0.37
LDB3-207ENST00000542786 ZP4Q12836 540 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 FOXF1Q12946 379 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 LPAL2Q16609 132 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 CCBE1Q6UXH8 406 aaPredicted RBP12.77□□□□□ -0.37
LDB3-207ENST00000542786 POC1BQ8TC44 478 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 ATOH1Q92858 354 aaPredicted RBP12.77□□□□□ -0.37
LDB3-207ENST00000542786 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.37
LDB3-207ENST00000542786 RASL10BQ96S79 203 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 PCDHGB2Q9Y5G2 931 aa12.77□□□□□ -0.37
LDB3-207ENST00000542786 A0A087WV48 116 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 IGHV1-45A0A0A0MS14 117 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 A0A1W2PQ72 361 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 TVP23AA6NH52 213 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 PIN1P1O15428 100 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 ZNF208O43345 1280 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 OR2T1O43869 369 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 GPRIN2O60269 458 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SERPINA3P01011 423 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 CELA2AP08217 269 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 SP9P0CG40 484 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 COX6A1P12074 109 aa12.76□□□□□ -0.37
LDB3-207ENST00000542786 EDNRAP25101 427 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms