RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 LCN6P62502 163 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ERHP84090 104 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 UNC50Q53HI1 259 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 CNIH2Q6PI25 160 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF595Q8IYB9 648 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SLC7A13Q8TCU3 470 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 FGGYQ96C11 551 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 LGALS12Q96DT0 336 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MRPS24Q96EL2 167 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ARPC5LQ9BPX5 153 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 WASH6PQ9NQA3 447 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ACOXLQ9NUZ1 547 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ARPC3O15145 178 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 UTS2O95399 124 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 C1orf105O95561 183 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SCGB1C2P0DMR2 95 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MEOX1P50221 254 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 PTTG1IPP53801 180 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ZMAT1Q5H9K5 638 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ANKRD16Q6P6B7 361 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 YRDCQ86U90 279 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 CDC20BQ86Y33 519 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 DTD2Q96FN9 168 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 PLK3Q9H4B4 646 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 PTTG3PQ9NZH4 202 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SALL4Q9UJQ4 1053 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 PROZP22891 400 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 WNT4P56705 351 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 CLINT1Q14677 625 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SPNS3Q6ZMD2 512 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 TSPYL5Q86VY4 417 aaPredicted RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 NETO1Q8TDF5 533 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MUL1Q969V5 352 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 DNMT3BQ9UBC3 853 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 NUBP2Q9Y5Y2 271 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SLC22A7Q9Y694 548 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 RPS10-NUDT3A0A1W2PQS6 291 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 FAM183AA6NL82 134 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 H0YGG7 62 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 I6L893 689 aaPredicted RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 GAPDHSO14556 408 aaPredicted RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 AHRP35869 848 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 RPS10P46783 165 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 PSMB3P49720 205 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 CTBSQ01459 385 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 EBPQ15125 230 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF813Q6ZN06 617 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 C17orf107Q6ZR85 190 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 SOX7Q9BT81 388 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 DDX31Q9H8H2 851 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 TIMM9Q9Y5J7 89 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 FAM90A27PA6NNH2 459 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 H3BNC9 293 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 FAM157BP0CG42 384 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 GPR12P47775 334 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 TAS2R19P59542 299 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 RGNQ15493 299 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 FAM78AQ5JUQ0 283 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MRPL2Q5T653 305 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 LINC00346Q8IVM7 164 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 CMTM4Q8IZR5 234 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MAFAQ8NHW3 353 aaPredicted RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 RTP4Q96DX8 246 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 NXT1Q9UKK6 140 aaKnown RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 TNFRSF10AO00220 468 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 AMTP48728 403 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 PRR7Q8TB68 274 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF583Q96ND8 569 aa9.3□□□□□ -0.92
TRERF1-205ENST00000541110 AJAP1Q9UKB5 411 aaPredicted RBP9.3□□□□□ -0.92
TRERF1-205ENST00000541110 MIA3Q5JRA6 1907 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 PPIHO43447 177 aaKnown RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 CDC34P49427 236 aaPredicted RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 GPLD1P80108 840 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 HOXA4Q00056 320 aaPredicted RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 LTB4RQ15722 352 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 OR5B3Q8NH48 314 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 DEDD2Q8WXF8 326 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 FUNDC2Q9BWH2 189 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ANTXRLA6NF34 631 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 THBS1P07996 1170 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 HTN1P15515 57 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 SLC7A9P82251 487 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 APOOLQ6UXV4 268 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 WDR5BQ86VZ2 330 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 OR6V1Q8N148 313 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 OR2T6Q8NHC8 308 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 MOB3AQ96BX8 217 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 RANBP9Q96S59 729 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 GALNT9Q9HCQ5 603 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 PPT2Q9UMR5 302 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ZNF142P52746 1687 aaPredicted RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 HLA-HP01893 362 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 CPEP16870 476 aa9.29□□□□□ -0.92
TRERF1-205ENST00000541110 ELLP55199 621 aaPredicted RBP9.29□□□□□ -0.92
TRERF1-205ENST00000541110 MFAP5Q13361 173 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms