RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 KIRREL2Q6UWL6 708 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 OR52H1Q8NGJ2 320 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 SYNPRQ8TBG9 265 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 SGTBQ96EQ0 304 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 WBP1Q96G27 269 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 GFI1Q99684 422 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 ULBP3Q9BZM4 244 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 FBRSQ9HAH7 460 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 TMEM27Q9HBJ8 222 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 ST6GALNAC2Q9UJ37 374 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 LOC100509620A0A075B734 347 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 A0A0A6YYC8 382 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 TCRBV21S2A2A0A5A6 115 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 I3L1I5 382 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 GOSR2O14653 212 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 PIN1P1O15428 100 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 SLC35E2P0CK97 266 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 HLXQ14774 488 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 HSD17B12Q53GQ0 312 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 ALG10BQ5I7T1 473 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 NHLRC3Q5JS37 347 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 CDK20Q8IZL9 346 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 AVL9Q8NBF6 648 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 RCBTB1Q8NDN9 531 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 HGDQ93099 445 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 MRPL38Q96DV4 380 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 BAIAP2Q9UQB8 552 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 IER3IP1Q9Y5U9 82 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 FKBP7Q9Y680 259 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 PIAS3Q9Y6X2 628 aa11.47□□□□□ -0.57
SFSWAP-208ENST00000539506 FAM74A7A6NL05 159 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 C10orf142B7Z368 130 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 MCIDASD6RGH6 385 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 SUSD5O60279 629 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 H2BFSP57053 126 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 BTG2P78543 158 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 FAM74A3Q4VXF1 159 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 TMEM69Q5SWH9 247 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ZNF511Q8NB15 262 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 VSTM2LQ96N03 204 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 AIFM2Q9BRQ8 373 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ADAT1Q9BUB4 502 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 LMAN2LQ9H0V9 348 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 C2orf42Q9NWW7 574 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ANKRD10Q9NXR5 420 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 TAS2R10Q9NYW0 307 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 LRIT1Q9P2V4 623 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 CHRNA9Q9UGM1 479 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ZNF230Q9UIE0 474 aaPredicted RBP11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ING1Q9UK53 422 aaPredicted RBP11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 SHISA7A6NL88 538 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 MCRIP1C9JLW8 97 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 CSN2P05814 226 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 CDK2P24941 298 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 RPL4P36578 427 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 RAB38P57729 211 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 OR7E24Q6IFN5 339 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 TMEM88Q6PEY1 159 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ZNF454Q8N9F8 522 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 OR4C3Q8NH37 302 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 RADILQ96JH8 1075 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 LMF1Q96S06 567 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 ZMAT3Q9HA38 289 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 HRH3Q9Y5N1 445 aa11.46□□□□□ -0.57
SFSWAP-208ENST00000539506 BRWD1Q9NSI6 2320 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 TDRD6O60522 2096 aaKnown RBP11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 MFSD2BA6NFX1 497 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 OR10H2O60403 315 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 GPANK1O95872 356 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 VSIG10L2P0DP72 767 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SRMP19623 302 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 NRG3P56975 720 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 RPS11P62280 158 aaKnown RBP eCLIP11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 PITPNAQ00169 270 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SORDQ00796 357 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 RPL13AP3Q6NVV1 102 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SLITRK4Q8IW52 837 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SMIM4Q8WVI0 70 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SLC25A28Q96A46 364 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF524Q96C55 264 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 LMF2Q9BU23 707 aaKnown RBP11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 HAO2Q9NYQ3 351 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 CAMK2AQ9UQM7 478 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 ENTPD2Q9Y5L3 495 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 SPACA6W5XKT8 324 aa11.46□□□□□ -0.58
SFSWAP-208ENST00000539506 PLSCR5A0PG75 271 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 PRR32B1ATL7 298 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 RLN2P04090 185 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF3P17036 446 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 NANOS3P60323 173 aaKnown RBP11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 YPEL5P62699 121 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 SIRPAP78324 504 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF273Q14593 569 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 RGS7BPQ6MZT1 257 aaPredicted RBP11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 FAM199XQ6PEV8 388 aaPredicted RBP11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 FGD2Q7Z6J4 655 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 SERTAD3Q9UJW9 196 aa11.45□□□□□ -0.58
SFSWAP-208ENST00000539506 HEATR5AQ86XA9 2040 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms