RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TDGF1P3P51864 188 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 SMSP52788 366 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 CDH15P55291 814 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 CLDN20P56880 219 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 EGR4Q05215 589 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 PUDPQ08623 228 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 TBCEQ15813 527 aaPredicted RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 ZNF239Q16600 458 aaKnown RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 CTU2Q2VPK5 515 aaKnown RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 TIMM50Q3ZCQ8 353 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 GXYLT1Q4G148 440 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 SOWAHCQ53LP3 525 aaPredicted RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 SYT6Q5T7P8 510 aaPredicted RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 FAM205BPQ63HN1 556 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 ZNF585AQ6P3V2 769 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 PGBD2Q6P3X8 592 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 SMARCD3Q6STE5 483 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 PCSK4Q6UW60 755 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 WDR88Q6ZMY6 472 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 FCRLAQ7L513 359 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 PXKQ7Z7A4 578 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 ANKRD13BQ86YJ7 626 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 GALNT11Q8NCW6 608 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 FAM81AQ8TBF8 368 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 FNDC8Q8TC99 324 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 OXGR1Q96P68 337 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 UCN2Q96RP3 112 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 MEPEQ9NQ76 525 aaPredicted RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 SPRR3Q9UBC9 169 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 PSORS1C1Q9UIG5 152 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 HIF3AQ9Y2N7 669 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 RPL36Q9Y3U8 105 aaKnown RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 LIPGQ9Y5X9 500 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 ZNF462Q96JM2 2506 aa9.17□□□□□ -0.94
CLPB-210ENST00000539148 PRRC2CQ9Y520 2896 aaKnown RBP9.17□□□□□ -0.94
CLPB-210ENST00000539148 RP1L1Q8IWN7 2480 aaPredicted RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 A0A1B0GUH1 482 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 A0A1W2PNR3 127 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ZC3H12DA2A288 527 aaKnown RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 A6NIZ1 184 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 NPIPB13A6NJU9 1138 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 NPIPB4C9JG80 1138 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 FTCDNL1E5RQL4 147 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PTGES3LE9PB15 166 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 M0R082 166 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 RNF13O43567 381 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 MITFO75030 526 aaPredicted RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 FZD7O75084 574 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 GASTP01350 101 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 IL2RAP01589 272 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 HMGN1P05114 100 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ASAH2BP0C7U1 165 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 APEHP13798 732 aaKnown RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 IL11P20809 199 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 NOS3P29474 1203 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PEX19P40855 299 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 GPR4P46093 362 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PER3P56645 1201 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 RAP1BP61224 184 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 RAP1AP62834 184 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 TUBA1BP68363 451 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 FOXK1P85037 733 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 RASGEF1BQ0VAM2 473 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ZP4Q12836 540 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PPP1R8Q12972 351 aaKnown RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 PON3Q15166 354 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PTGES3Q15185 160 aaKnown RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 POU4F3Q15319 338 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 SEC23BQ15437 767 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 NEDD8Q15843 81 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 OCLNQ16625 522 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ALG10Q5BKT4 473 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 TMEM201Q5SNT2 666 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 C1orf185Q5T7R7 199 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 UBE2UQ5VVX9 321 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 SLX4IPQ5VYV7 408 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 NSUN5P2Q63ZY6 315 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 GPR139Q6DWJ6 353 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 XAF1Q6GPH4 301 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 Q6ZPB1 254 aaPredicted RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 PTCHD4Q6ZW05 846 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 TUBA1AQ71U36 451 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PRICKLE2Q7Z3G6 844 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ZER1Q7Z7L7 766 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 UEVLDQ8IX04 471 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ENTHD1Q8IYW4 607 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 OR9Q2Q8NGE9 314 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PFN4Q8NHR9 129 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ZNF417Q8TAU3 575 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 FANK1Q8TC84 345 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 GTPBP3Q969Y2 492 aaKnown RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 ADAD1Q96M93 576 aaKnown RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 SLC38A2Q96QD8 506 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 TRIB1Q96RU8 372 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 ZNF587Q96SQ5 575 aaPredicted RBP9.16□□□□□ -0.94
CLPB-210ENST00000539148 KLHDC3Q9BQ90 382 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 COPS4Q9BT78 406 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 PTDSS2Q9BVG9 487 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 CCDC90BQ9GZT6 254 aa9.16□□□□□ -0.94
CLPB-210ENST00000539148 RNF122Q9H9V4 155 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms