RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 MRGPRGQ86SM5 289 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PTRH1Q86Y79 214 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 HIPK1Q86Z02 1210 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GLB1L2Q8IW92 636 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OFCC1Q8IZS5 231 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RNF175Q8N4F7 328 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CPEB3Q8NE35 698 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FAM71CQ8NEG0 241 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 C1orf162Q8NEQ5 155 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC24A4Q8NFF2 622 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OR4C15Q8NGM1 316 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OR10A6Q8NH74 314 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OR5AK3PQ8NH89 298 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OR10J5Q8NHC4 309 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 MUCL1Q96DR8 90 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ASB9Q96DX5 294 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RBP7Q96R05 134 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SNX18Q96RF0 628 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 EBF4Q9BQW3 602 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ALG12Q9BV10 488 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SRA1Q9HD15 236 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TAS2R3Q9NYW6 316 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ABCD2Q9UBJ2 740 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF229Q9UJW7 825 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 COPS3Q9UNS2 423 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF835Q9Y2P0 537 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TMED7Q9Y3B3 224 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ENPP4Q9Y6X5 453 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 DSPPQ9NZW4 1301 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PTPRBP23467 1997 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TRBV5-3A0A0A0MS03 114 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 A0A0X1KG70 313 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 A0A1W2PPH5 198 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 A0A1W2PPL8 197 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CDHR4A6H8M9 788 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ARRDC5A6NEK1 342 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 MCIDASD6RGH6 385 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FTCDNL1E5RQL4 147 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 XKRYO14609 159 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF682O95780 498 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 LGI1O95970 557 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TFAP2AP05549 437 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GSNP06396 782 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CTSBP07858 339 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CD3GP09693 182 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RAP2AP10114 183 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CD8BP10966 210 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ETFAP13804 333 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 NDUFB7P17568 137 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GGT1P19440 569 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FPR1P21462 350 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC6A6P31641 620 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 THBS2P35442 1172 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GSK3BP49841 420 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FLOT2Q14254 428 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 POU4F3Q15319 338 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 NRF1Q16656 503 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TRIM16LQ309B1 348 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PCGF3Q3KNV8 242 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 NADK2Q4G0N4 442 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ESCO2Q56NI9 601 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ALG10BQ5I7T1 473 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TOR2AQ5JU69 321 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 DCST1Q5T197 706 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 MRPL2Q5T653 305 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PRAMEF20Q5VT98 475 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 LCN8Q6JVE9 175 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ANKRD26P1Q6NSI1 321 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC22A25Q6T423 547 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PAQR6Q6TCH4 344 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 NPSR1Q6W5P4 371 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CBLL1Q75N03 491 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FGD2Q7Z6J4 655 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RETREG3Q86VR2 466 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CALHM3Q86XJ0 350 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 UEVLDQ8IX04 471 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ZZZ3Q8IYH5 903 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ULK2Q8IYT8 1036 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 DEFB107AQ8IZN7 70 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FAM156AQ8NDB6 213 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FAM83FQ8NEG4 500 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PRR7Q8TB68 274 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PNPT1Q8TCS8 783 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GNPDA2Q8TDQ7 276 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GPR119Q8TDV5 335 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC38A5Q8WUX1 472 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RNASE6Q93091 150 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TMEM45BQ96B21 275 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SNRNP40Q96DI7 357 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PYURFQ96I23 114 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RACGAP1Q9H0H5 632 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC38A1Q9H2H9 487 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 UPB1Q9UBR1 384 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 WARS2Q9UGM6 360 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF223Q9UK11 482 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PCDHB10Q9UN67 800 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PMF1-BGLAPU3KQ54 211 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 A0A0G2JMP0 313 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms