RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
CHFR-216ENST00000538235 UGT2B10P36537 528 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 HMGA2P52926 109 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 ZP4Q12836 540 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 KPNB1Q14974 876 aaKnown RBP11.53□□□□□ -0.56
CHFR-216ENST00000538235 TMEM225Q6GV28 225 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 OR2T5Q6IEZ7 315 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 NIPAL3Q6P499 406 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 TMPRSS11FQ6ZWK6 438 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 AAED1Q7RTV5 226 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 CYP4Z1Q86W10 505 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 KIF18BQ86Y91 864 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 OR2T29Q8NH02 315 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 OR51A7Q8NH64 312 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 HTRA1Q92743 480 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 APH1AQ96BI3 265 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 LRGUKQ96M69 825 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 ALPK1Q96QP1 1244 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 TNFRSF13CQ96RJ3 184 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 CCM2LQ9NUG4 571 aaPredicted RBP11.53□□□□□ -0.56
CHFR-216ENST00000538235 EMC3Q9P0I2 261 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 C6orf203Q9P0P8 240 aaPredicted RBP11.53□□□□□ -0.56
CHFR-216ENST00000538235 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 SIGLEC7Q9Y286 467 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 U3KQV3 271 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 CADP27708 2225 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 ABCA4P78363 2273 aa11.53□□□□□ -0.56
CHFR-216ENST00000538235 PDZD2O15018 2839 aa11.52□□□□□ -0.56
CHFR-216ENST00000538235 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 EFCAB9A8MZ26 197 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 BLOC1S5-TXNDC5H3BN57 136 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 H3BNX3 289 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 GPR171O14626 319 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 CLOCKO15516 846 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 PTP4A3O75365 173 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 SEC14L2O76054 403 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 POU2F1P14859 743 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 GSSP48637 474 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 KRTAP10-9P60411 292 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 CHRNB3Q05901 458 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 ARMC4Q5T2S8 1044 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 C1orf146Q5VVC0 180 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 CARD17Q5XLA6 110 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 FBXW9Q5XUX1 488 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 GTF2IRD2BQ6EKJ0 949 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 Q6ZT83 130 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 YTHDF3Q7Z739 585 aaKnown RBP11.52□□□□□ -0.57
CHFR-216ENST00000538235 GTF2IRD2Q86UP8 949 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 UEVLDQ8IX04 471 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 ZNF433Q8N7K0 673 aaPredicted RBP11.52□□□□□ -0.57
CHFR-216ENST00000538235 OR8D4Q8NGM9 314 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 ASB10Q8WXI3 467 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.57
CHFR-216ENST00000538235 RSRC1Q96IZ7 334 aaKnown RBP11.52□□□□□ -0.57
CHFR-216ENST00000538235 WFIKKN1Q96NZ8 548 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 TSPAN32Q96QS1 320 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 PLA2G12AQ9BZM1 189 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 KLHL4Q9C0H6 718 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 SLCO5A1Q9H2Y9 848 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
CHFR-216ENST00000538235 FAM32AQ9Y421 112 aaKnown RBP11.52□□□□□ -0.57
CHFR-216ENST00000538235 LRBAP50851 2863 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 TNFRSF11BO00300 401 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 MRPL33O75394 65 aaKnown RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 VAMP5O95183 116 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 ZNF43P17038 809 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 ITGA2P17301 1181 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 PSMB1P20618 241 aaKnown RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 AHCYP23526 432 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 RASSF2P50749 326 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 BIDP55957 195 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 SORDQ00796 357 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 FAPQ12884 760 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 CAMK2DQ13557 499 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 MFSD13AQ14CX5 517 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 ACKR1Q16570 336 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 FAM98BQ52LJ0 330 aaKnown RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 SLC35D2Q76EJ3 337 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 FAM122BQ7Z309 247 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 PXKQ7Z7A4 578 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 RNF113BQ8IZP6 322 aaKnown RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 HDAC2Q92769 488 aaKnown RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 S100PBPQ96BU1 408 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 ZNF347Q96SE7 839 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 TRIM15Q9C019 465 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 DENND2DQ9H6A0 471 aaPredicted RBP11.51□□□□□ -0.57
CHFR-216ENST00000538235 NPAP1Q9NZP6 1156 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 RCE1Q9Y256 329 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 TACC2O95359 2948 aa11.51□□□□□ -0.57
CHFR-216ENST00000538235 POLQO75417 2590 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 CSMD1Q96PZ7 3565 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 A0A1W2PR80 420 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 DEFB108AA8MXU0 73 aa11.5□□□□□ -0.57
CHFR-216ENST00000538235 H7C1C5 153 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms